RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 MAP7D2Q96T17 732 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 NUP58Q9BVL2 599 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 NFKBIZQ9BYH8 718 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 UPF3AQ9H1J1 476 aaKnown RBP8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 VPS16Q9H269 839 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 RNPEPQ9H4A4 650 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 SUGCTQ9HAC7 445 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 KIAA1586Q9HCI6 787 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 POLD4Q9HCU8 107 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 DMAC2Q9NW81 257 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 TAB2Q9NYJ8 693 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 SUCLA2Q9P2R7 463 aaPredicted RBP8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 ARMCX3Q9UH62 379 aaPredicted RBP8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 MYH11P35749 1972 aa8.91□□□□□ -0.98
TOPBP1-202ENST00000503338 ZMYM2Q9UBW7 1377 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 ARID2Q68CP9 1835 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 HAS3O00219 553 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 PES1O00541 588 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 EXOC3O60645 756 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 LDHAP00338 332 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 ZNF286BP0CG31 522 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 KRT13P13646 458 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 SFPQP23246 707 aaKnown RBP eCLIP8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 KLRC1P26715 233 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 CST5P28325 142 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 CNGA1P29973 690 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 PBX1P40424 430 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 CACNB2Q08289 660 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 LAMTOR4Q0VGL1 99 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 MFSD10Q14728 455 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 PCBP1Q15365 356 aaKnown RBP eCLIP8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 GRIK4Q16099 956 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 MAPK6Q16659 721 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 KIAA0753Q2KHM9 967 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 TMEM63BQ5T3F8 832 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 CEP135Q66GS9 1140 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 CDCA2Q69YH5 1023 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 MTHFD1LQ6UB35 978 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 INTS8Q75QN2 995 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 ZNF410Q86VK4 478 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 PPFIBP1Q86W92 1011 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 IFNLR1Q8IU57 520 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 TRIM59Q8IWR1 403 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 FAM186BQ8IYM0 893 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 XXYLT1Q8NBI6 393 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 PCSK9Q8NBP7 692 aaKnown RBP8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 CCDC112Q8NEF3 446 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 ASAP3Q8TDY4 903 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 BSNDQ8WZ55 320 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 BICD1Q96G01 975 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 ERGIC2Q96RQ1 377 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 MTG1Q9BT17 334 aaPredicted RBP8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 NDST4Q9H3R1 872 aa8.9□□□□□ -0.98
TOPBP1-202ENST00000503338 SMIM35A0A1B0GVV1 85 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 GTPBP10A4D1E9 387 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 MBLAC1A4D2B0 266 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 HNRNPDLO14979 420 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 CLIC2O15247 247 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 ADCY6O43306 1168 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 STX10O60499 249 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 N4BP1O75113 896 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 CABYRO75952 493 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 MYL3P08590 195 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 C6orf222P0C671 652 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 PRKAR2AP13861 404 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 HSPA6P17066 643 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 PHKA2P46019 1235 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 PSEN2P49810 448 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 LIG4P49917 911 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 PURAQ00577 322 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 KCNA1Q09470 495 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 CETN1Q12798 172 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 CAPSQ13938 189 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 FIGNQ5HY92 759 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 MAP3K21Q5TCX8 1036 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 ZPBP2Q6X784 338 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 CCDC186Q7Z3E2 898 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 CNGA4Q8IV77 575 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 NME8Q8N427 588 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 METTL13Q8N6R0 699 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 LINC01465Q8N7H1 131 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 RNF149Q8NC42 400 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 ZNF296Q8WUU4 475 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 PRPF31Q8WWY3 499 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 CCDC51Q96ER9 411 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 PRIMPOLQ96LW4 560 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 MRPL4Q9BYD3 311 aaKnown RBP8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 PRMT7Q9NVM4 692 aaPredicted RBP8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 INTS13Q9NVM9 706 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 AKT3Q9Y243 479 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 DAAM1Q9Y4D1 1078 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 STYXL1Q9Y6J8 313 aa8.89□□□□□ -0.99
TOPBP1-202ENST00000503338 ADGRA3Q8IWK6 1321 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 C17orf102A2RUQ5 167 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 AKR1B15C9JRZ8 316 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 P4HA2O15460 535 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 TEX33O43247 280 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 AKAP3O75969 853 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 AFPP02771 609 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms