RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	TBKBP1	A7MCY6	615 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	HAX1	O00165	279 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	RFXAP	O00287	272 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	LPXN	O60711	386 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	ZNF623	O75123	536 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	FGFR4	P22455	802 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	GPM6B	Q13491	265 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	FAM102B	Q5T8I3	360 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	ZBTB8OS	Q8IWT0	167 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	CNNM3	Q8NE01	707 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	GDPD5	Q8WTR4	605 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	KIFAP3	Q92845	792 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	PGBD4	Q96DM1	585 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	CCDC51	Q96ER9	411 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	CDK5RAP3	Q96JB5	506 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	TIPIN	Q9BVW5	301 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	MRPL9	Q9BYD2	267 aa	Known RBP	11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	C2orf40	Q9H1Z8	148 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	BHMT2	Q9H2M3	363 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	PCDHB12	Q9Y5F1	795 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	PRUNE2	Q8WUY3	3088 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	NLRC5	Q86WI3	1866 aa		11.66	□□□□□ -0.54
FXR1-222	ENST00000498658	INO80B-WBP1	J3KQ70	363 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	STX6	O43752	255 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	CSDE1	O75534	798 aa	Known RBP	11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	EYA4	O95677	639 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	IBSP	P21815	317 aa	Predicted RBP	11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	GLRA2	P23416	452 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	LONP1	P36776	959 aa	Known RBP	11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	UBA7	P41226	1012 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	NAMPT	P43490	491 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	CAPS	Q13938	189 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	IL17A	Q16552	155 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	TIGD5	Q53EQ6	642 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	HYI	Q5T013	277 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	SPOUT1	Q5T280	376 aa	Known RBP	11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	NOTUM	Q6P988	496 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	HACE1	Q8IYU2	909 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	LRRC43	Q8N309	656 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	MICALL1	Q8N3F8	863 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	RNF169	Q8NCN4	708 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	PPM1E	Q8WY54	764 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	MRPL38	Q96DV4	380 aa	Known RBP	11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	CALML4	Q96GE6	196 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	IFT74	Q96LB3	600 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	PRIMPOL	Q96LW4	560 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	C17orf75	Q9HAS0	396 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	FAM105A	Q9NUU6	356 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	COG5	Q9UP83	839 aa		11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	MRPL42	Q9Y6G3	142 aa	Known RBP	11.65	□□□□□ -0.54
FXR1-222	ENST00000498658	PHLPP2	Q6ZVD8	1323 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	UNC80	Q8N2C7	3258 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	LRRIQ4	A6NIV6	560 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	LINC00271	P0C7V0	271 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	LAG3	P18627	525 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	REST	Q13127	1097 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	SF3A1	Q15459	793 aa	Known RBP	11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	CCDC85B	Q15834	202 aa	Predicted RBP	11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	ECM1	Q16610	540 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	AAK1	Q2M2I8	961 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	PAN2	Q504Q3	1202 aa	Known RBP	11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	GLB1L	Q6UWU2	654 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	MAEA	Q7L5Y9	396 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	SPRED2	Q7Z698	418 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	ZNF598	Q86UK7	904 aa	Known RBP	11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	DEPTOR	Q8TB45	409 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	ASAP3	Q8TDY4	903 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	PPP2R3C	Q969Q6	453 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	UBN1	Q9NPG3	1134 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	KCND2	Q9NZV8	630 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	MTMR6	Q9Y217	621 aa		11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	COL4A4	P53420	1690 aa	Predicted RBP	11.64	□□□□□ -0.55
FXR1-222	ENST00000498658	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	CNTNAP2	Q9UHC6	1331 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.63	□□□□□ -0.55
FXR1-222	ENST00000498658		A0A0C4DFX4	3053 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658		A0A087WWV3	80 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	PP2D1	A8MPX8	630 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	NCK2	O43639	380 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	FGFR1	P11362	822 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	HOXA11	P31270	313 aa	Predicted RBP	11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	PPM1A	P35813	382 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	EFNA5	P52803	228 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	UBE3A	Q05086	875 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	MBTD1	Q05BQ5	628 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	SKIV2L	Q15477	1246 aa	Known RBP	11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	ZRSR1	Q15695	479 aa	Known RBP	11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	MAPK6	Q16659	721 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	CABP7	Q86V35	215 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	RASSF8	Q8NHQ8	419 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	DRC1	Q96MC2	740 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	CASD1	Q96PB1	797 aa		11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	MMTAG2	Q9BU76	263 aa	Known RBP	11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	TRIM6	Q9C030	488 aa	Predicted RBP	11.63	□□□□□ -0.55
FXR1-222	ENST00000498658	MINDY3	Q9H8M7	445 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms