RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 CLUL1Q15846 466 aa17.94■□□□□ 0.46
NR1H3-227ENST00000498548 MCTP1Q6DN14 999 aa17.94■□□□□ 0.46
NR1H3-227ENST00000498548 TBC1D32Q96NH3 1257 aa17.94■□□□□ 0.46
NR1H3-227ENST00000498548 FAM105AQ9NUU6 356 aa17.94■□□□□ 0.46
NR1H3-227ENST00000498548 PCDHB6Q9Y5E3 794 aa17.94■□□□□ 0.46
NR1H3-227ENST00000498548 NT5C1B-RDH14C9J2C7 533 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 GAS2O43903 313 aaKnown RBP17.93■□□□□ 0.46
NR1H3-227ENST00000498548 GJB2P29033 226 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 ARL2P36404 184 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 ECM1Q16610 540 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 PTCRAQ6ISU1 281 aaPredicted RBP17.93■□□□□ 0.46
NR1H3-227ENST00000498548 POTEGQ6S5H5 508 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 KCNT2Q6UVM3 1135 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 LRRC43Q8N309 656 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 CPB2Q96IY4 423 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 TUFT1Q9NNX1 390 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 GPRC5CQ9NQ84 441 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 AGPAT5Q9NUQ2 364 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 INPP5FQ9Y2H2 1132 aa17.93■□□□□ 0.46
NR1H3-227ENST00000498548 PER2O15055 1255 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 DGAT1O75907 488 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 XRCC6P12956 609 aaKnown RBP eCLIP17.92■□□□□ 0.46
NR1H3-227ENST00000498548 GLRA2P23416 452 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 HOXA11P31270 313 aaPredicted RBP17.92■□□□□ 0.46
NR1H3-227ENST00000498548 NRIP1P48552 1158 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 PTGDRQ13258 359 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 CAPSQ13938 189 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 COL19A1Q14993 1142 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 UBXN11Q5T124 520 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 ZNF558Q96NG5 402 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 POLR3CQ9BUI4 534 aaPredicted RBP17.92■□□□□ 0.46
NR1H3-227ENST00000498548 TRAIPQ9BWF2 469 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 POLR3FQ9H1D9 316 aaPredicted RBP17.92■□□□□ 0.46
NR1H3-227ENST00000498548 POLD4Q9HCU8 107 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 PCDHB2Q9Y5E7 798 aa17.92■□□□□ 0.46
NR1H3-227ENST00000498548 CUL9Q8IWT3 2517 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 GRXCR2A6NFK2 248 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 INO80B-WBP1J3KQ70 363 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 OFD1O75665 1012 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 TRAPPC10P48553 1259 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 PTENP60484 403 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 ORC2Q13416 577 aaPredicted RBP17.91■□□□□ 0.46
NR1H3-227ENST00000498548 ADAM15Q13444 863 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 MXD4Q14582 209 aaPredicted RBP17.91■□□□□ 0.46
NR1H3-227ENST00000498548 PLPP4Q5VZY2 271 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 ERMNQ8TAM6 284 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 MRPS27Q92552 414 aaKnown RBP17.91■□□□□ 0.46
NR1H3-227ENST00000498548 NACC1Q96RE7 527 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 CD320Q9NPF0 282 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 TLR9Q9NR96 1032 aa17.91■□□□□ 0.46
NR1H3-227ENST00000498548 NCK2O43639 380 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 ZNF623O75123 536 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 TBX10O75333 385 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 ERLIN2O94905 339 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 SKIP12755 728 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 RPA1P27694 616 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 CCT6AP40227 531 aaKnown RBP17.9■□□□□ 0.46
NR1H3-227ENST00000498548 AFF1P51825 1210 aaKnown RBP17.9■□□□□ 0.46
NR1H3-227ENST00000498548 BCAR1P56945 870 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 RBM10P98175 930 aaKnown RBP17.9■□□□□ 0.46
NR1H3-227ENST00000498548 UBE3AQ05086 875 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 TFDP1Q14186 410 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 IL17AQ16552 155 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 AGMOQ6ZNB7 445 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 EIF2AQ9BY44 585 aaKnown RBP17.9■□□□□ 0.46
NR1H3-227ENST00000498548 GBP3Q9H0R5 595 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 TLE6Q9H808 572 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 SPG21Q9NZD8 308 aa17.9■□□□□ 0.46
NR1H3-227ENST00000498548 DBR1Q9UK59 544 aaKnown RBP17.9■□□□□ 0.46
NR1H3-227ENST00000498548 H3BQV1 296 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 FSCN2O14926 492 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 TSPAN1O60635 241 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 NDUFV1P49821 464 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 FXR2P51116 673 aaKnown RBP eCLIP17.89■□□□□ 0.45
NR1H3-227ENST00000498548 PLCB3Q01970 1234 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 MBTD1Q05BQ5 628 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 CSPP1Q1MSJ5 1256 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 NOMO2Q5JPE7 1267 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 GLB1LQ6UWU2 654 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 MRPL10Q7Z7H8 261 aaKnown RBP17.89■□□□□ 0.45
NR1H3-227ENST00000498548 CDR2LQ86X02 465 aaPredicted RBP17.89■□□□□ 0.45
NR1H3-227ENST00000498548 SLC39A11Q8N1S5 342 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 PGBD4Q96DM1 585 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 NRDE2Q9H7Z3 1164 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 TBC1D13Q9NVG8 400 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 LRWD1Q9UFC0 647 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 PUF60Q9UHX1 559 aaKnown RBP17.89■□□□□ 0.45
NR1H3-227ENST00000498548 SMC3Q9UQE7 1217 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 KIF3AQ9Y496 699 aa17.89■□□□□ 0.45
NR1H3-227ENST00000498548 ARHGEF35A5YM69 484 aa17.88■□□□□ 0.45
NR1H3-227ENST00000498548 LRRIQ4A6NIV6 560 aa17.88■□□□□ 0.45
NR1H3-227ENST00000498548 PP2D1A8MPX8 630 aa17.88■□□□□ 0.45
NR1H3-227ENST00000498548 B4GALT5O43286 388 aa17.88■□□□□ 0.45
NR1H3-227ENST00000498548 ZC3H11AO75152 810 aaKnown RBP eCLIP17.88■□□□□ 0.45
NR1H3-227ENST00000498548 CDC25AP30304 524 aa17.88■□□□□ 0.45
NR1H3-227ENST00000498548 MCM2P49736 904 aa17.88■□□□□ 0.45
NR1H3-227ENST00000498548 RAB27AP51159 221 aa17.88■□□□□ 0.45
NR1H3-227ENST00000498548 KRT17Q04695 432 aa17.88■□□□□ 0.45
NR1H3-227ENST00000498548 AMHR2Q16671 573 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms