RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 SRGAP1Q7Z6B7 1085 aa16.33■□□□□ 0.2
HPS1-214ENST00000498219 ECHDC2Q86YB7 292 aa16.33■□□□□ 0.2
HPS1-214ENST00000498219 TMEM192Q8IY95 271 aa16.33■□□□□ 0.2
HPS1-214ENST00000498219 BSNDQ8WZ55 320 aa16.33■□□□□ 0.2
HPS1-214ENST00000498219 EPSTI1Q96J88 318 aa16.33■□□□□ 0.2
HPS1-214ENST00000498219 INO80BQ9C086 356 aaPredicted RBP16.33■□□□□ 0.2
HPS1-214ENST00000498219 RNF19AQ9NV58 838 aa16.33■□□□□ 0.2
HPS1-214ENST00000498219 INO80B-WBP1J3KQ70 363 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 YEATS4O95619 227 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 EYA4O95677 639 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 CYP11B2P19099 503 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 CTNNB1P35222 781 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 LONP1P36776 959 aaKnown RBP16.32■□□□□ 0.2
HPS1-214ENST00000498219 PTENP60484 403 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 NUCB2P80303 420 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 TFDP1Q14186 410 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 MXD4Q14582 209 aaPredicted RBP16.32■□□□□ 0.2
HPS1-214ENST00000498219 TWF2Q6IBS0 349 aaKnown RBP16.32■□□□□ 0.2
HPS1-214ENST00000498219 CABP7Q86V35 215 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 CMTR2Q8IYT2 770 aaKnown RBP16.32■□□□□ 0.2
HPS1-214ENST00000498219 KRI1Q8N9T8 703 aaKnown RBP16.32■□□□□ 0.2
HPS1-214ENST00000498219 MCPH1Q8NEM0 835 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 LPPQ93052 612 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 CPB2Q96IY4 423 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 PRDM6Q9NQX0 595 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 TMEM161AQ9NX61 479 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 DNM3Q9UQ16 869 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 MTCH2Q9Y6C9 303 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 STK24Q9Y6E0 443 aa16.32■□□□□ 0.2
HPS1-214ENST00000498219 LRRIQ4A6NIV6 560 aa16.31■□□□□ 0.2
HPS1-214ENST00000498219 SSBP05455 408 aaKnown RBP eCLIP16.31■□□□□ 0.2
HPS1-214ENST00000498219 ATF7P17544 494 aaPredicted RBP16.31■□□□□ 0.2
HPS1-214ENST00000498219 UBA7P41226 1012 aa16.31■□□□□ 0.2
HPS1-214ENST00000498219 MBTD1Q05BQ5 628 aa16.31■□□□□ 0.2
HPS1-214ENST00000498219 GPM6BQ13491 265 aa16.31■□□□□ 0.2
HPS1-214ENST00000498219 KARSQ15046 597 aaKnown RBP16.31■□□□□ 0.2
HPS1-214ENST00000498219 LRRC15Q8TF66 581 aa16.31■□□□□ 0.2
HPS1-214ENST00000498219 SYMPKQ92797 1274 aaKnown RBP16.31■□□□□ 0.2
HPS1-214ENST00000498219 AK8Q96MA6 479 aa16.31■□□□□ 0.2
HPS1-214ENST00000498219 RUSC1Q9BVN2 902 aa16.31■□□□□ 0.2
HPS1-214ENST00000498219 AGPAT5Q9NUQ2 364 aa16.31■□□□□ 0.2
HPS1-214ENST00000498219 CFAP45Q9UL16 551 aa16.31■□□□□ 0.2
HPS1-214ENST00000498219 A0A0U1RQF3 1178 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 MEIS3P2A8K0S8 358 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 PPP6R2O75170 966 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 CSPG5O95196 566 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 CLLU1OSQ5K130 101 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 ATL3Q6DD88 541 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 ZNF598Q86UK7 904 aaKnown RBP16.3■□□□□ 0.2
HPS1-214ENST00000498219 HELQQ8TDG4 1101 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 CDK5RAP3Q96JB5 506 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 KIFC3Q9BVG8 833 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 ELAC1Q9H777 363 aaKnown RBP16.3■□□□□ 0.2
HPS1-214ENST00000498219 CHST12Q9NRB3 414 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 DACT1Q9NYF0 836 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 RCOR1Q9UKL0 485 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 MORC2Q9Y6X9 1032 aaPredicted RBP16.3■□□□□ 0.2
HPS1-214ENST00000498219 PLXNA4Q9HCM2 1894 aa16.3■□□□□ 0.2
HPS1-214ENST00000498219 B4GALT5O43286 388 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 GTPBP6O43824 516 aaPredicted RBP16.29■□□□□ 0.2
HPS1-214ENST00000498219 TSPAN1O60635 241 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 ERLIN2O94905 339 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 LIG1P18858 919 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 HOXA11P31270 313 aaPredicted RBP16.29■□□□□ 0.2
HPS1-214ENST00000498219 BMPR1AP36894 532 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 KRT85P78386 507 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 RAD51AP2Q09MP3 1159 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 AMHR2Q16671 573 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 TMEM119Q4V9L6 283 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 HYIQ5T013 277 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 UBXN11Q5T124 520 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 SPOUT1Q5T280 376 aaKnown RBP16.29■□□□□ 0.2
HPS1-214ENST00000498219 RINT1Q6NUQ1 792 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 CDR2LQ86X02 465 aaPredicted RBP16.29■□□□□ 0.2
HPS1-214ENST00000498219 IFNLR1Q8IU57 520 aaPredicted RBP16.29■□□□□ 0.2
HPS1-214ENST00000498219 LEO1Q8WVC0 666 aaPredicted RBP16.29■□□□□ 0.2
HPS1-214ENST00000498219 CLP1Q92989 425 aaKnown RBP16.29■□□□□ 0.2
HPS1-214ENST00000498219 SAMD11Q96NU1 681 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 CASD1Q96PB1 797 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 PANK2Q9BZ23 570 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 GDPD2Q9HCC8 539 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 FAM105AQ9NUU6 356 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 PCDHA7Q9UN72 937 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 USP20Q9Y2K6 914 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 ATP6V1DQ9Y5K8 247 aa16.29■□□□□ 0.2
HPS1-214ENST00000498219 NPHP3-ACAD11A0A0J9YXS1 232 aa16.28■□□□□ 0.2
HPS1-214ENST00000498219 HIP1RO75146 1068 aa16.28■□□□□ 0.2
HPS1-214ENST00000498219 PLA2G4BP0C869 781 aa16.28■□□□□ 0.2
HPS1-214ENST00000498219 PLCG1P19174 1290 aa16.28■□□□□ 0.2
HPS1-214ENST00000498219 ME1P48163 572 aa16.28■□□□□ 0.2
HPS1-214ENST00000498219 CACNB1Q02641 598 aaPredicted RBP16.28■□□□□ 0.2
HPS1-214ENST00000498219 DHX8Q14562 1220 aaKnown RBP16.28■□□□□ 0.2
HPS1-214ENST00000498219 TPRNQ4KMQ1 711 aa16.28■□□□□ 0.2
HPS1-214ENST00000498219 AXDND1Q5T1B0 1012 aaPredicted RBP16.28■□□□□ 0.2
HPS1-214ENST00000498219 LRRC55Q6ZSA7 311 aa16.28■□□□□ 0.2
HPS1-214ENST00000498219 FAM43BQ6ZT52 329 aaPredicted RBP16.28■□□□□ 0.2
HPS1-214ENST00000498219 RASSF8Q8NHQ8 419 aa16.28■□□□□ 0.2
HPS1-214ENST00000498219 CALML4Q96GE6 196 aa16.28■□□□□ 0.2
HPS1-214ENST00000498219 SPATA32Q96LK8 384 aa16.28■□□□□ 0.2
HPS1-214ENST00000498219 IPO9Q96P70 1041 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms