RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RNF19AQ9NV58 838 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 DBR1Q9UK59 544 aaKnown RBP17.04■□□□□ 0.32
NUP50-219ENST00000497960 RBM19Q9Y4C8 960 aaKnown RBP17.04■□□□□ 0.32
NUP50-219ENST00000497960 PCDHB6Q9Y5E3 794 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 STK24Q9Y6E0 443 aa17.04■□□□□ 0.32
NUP50-219ENST00000497960 LAD1O00515 517 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 USO1O60763 962 aaKnown RBP17.03■□□□□ 0.32
NUP50-219ENST00000497960 ERLIN2O94905 339 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 BMP1P13497 986 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 MUTP22033 750 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 NCBP1Q09161 790 aaKnown RBP17.03■□□□□ 0.32
NUP50-219ENST00000497960 PCBP1Q15365 356 aaKnown RBP eCLIP17.03■□□□□ 0.32
NUP50-219ENST00000497960 RILPL1Q5EBL4 403 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 EP400NLQ6ZTU2 488 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 COLGALT1Q8NBJ5 622 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 MCPH1Q8NEM0 835 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 POF1BQ8WVV4 589 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 RSPH1Q8WYR4 309 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 MRPL9Q9BYD2 267 aaKnown RBP17.03■□□□□ 0.32
NUP50-219ENST00000497960 CWH43Q9H720 699 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 FAM105AQ9NUU6 356 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 LRWD1Q9UFC0 647 aa17.03■□□□□ 0.32
NUP50-219ENST00000497960 FNDC1Q4ZHG4 1894 aaPredicted RBP17.03■□□□□ 0.32
NUP50-219ENST00000497960 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.02■□□□□ 0.32
NUP50-219ENST00000497960 ARHGEF35A5YM69 484 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 ZNF623O75123 536 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 ATF7P17544 494 aaPredicted RBP17.02■□□□□ 0.32
NUP50-219ENST00000497960 KCNA5P22460 613 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 ARL2P36404 184 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 CCT6AP40227 531 aaKnown RBP17.02■□□□□ 0.32
NUP50-219ENST00000497960 PTENP60484 403 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 UBE3AQ05086 875 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 POU5F1BQ06416 359 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 PDIA5Q14554 519 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 CLLU1OSQ5K130 101 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 POTEGQ6S5H5 508 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 HELQQ8TDG4 1101 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 ASAP3Q8TDY4 903 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 PGBD4Q96DM1 585 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 PABPC5Q96DU9 382 aaKnown RBP17.02■□□□□ 0.32
NUP50-219ENST00000497960 UHRF1Q96T88 793 aaPredicted RBP17.02■□□□□ 0.32
NUP50-219ENST00000497960 POLR3FQ9H1D9 316 aaPredicted RBP17.02■□□□□ 0.32
NUP50-219ENST00000497960 MINDY3Q9H8M7 445 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 HCSTQ9UBK5 93 aa17.02■□□□□ 0.32
NUP50-219ENST00000497960 INO80B-WBP1J3KQ70 363 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 FGF18O76093 207 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 PRPHP41219 470 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 CAMK1Q14012 370 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 GLB1LQ6UWU2 654 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 LRRC55Q6ZSA7 311 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 MAEAQ7L5Y9 396 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 BRAPQ7Z569 592 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 IFNLR1Q8IU57 520 aaPredicted RBP17.01■□□□□ 0.31
NUP50-219ENST00000497960 MICAL1Q8TDZ2 1067 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 ZNF558Q96NG5 402 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.01■□□□□ 0.31
NUP50-219ENST00000497960 PUF60Q9UHX1 559 aaKnown RBP17.01■□□□□ 0.31
NUP50-219ENST00000497960 MTMR6Q9Y217 621 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 PCDHB2Q9Y5E7 798 aa17.01■□□□□ 0.31
NUP50-219ENST00000497960 PDIA4P13667 645 aaKnown RBP17■□□□□ 0.31
NUP50-219ENST00000497960 GLRA2P23416 452 aa17■□□□□ 0.31
NUP50-219ENST00000497960 DNAJB1P25685 340 aa17■□□□□ 0.31
NUP50-219ENST00000497960 AXLP30530 894 aa17■□□□□ 0.31
NUP50-219ENST00000497960 HOXA11P31270 313 aaPredicted RBP17■□□□□ 0.31
NUP50-219ENST00000497960 PPM1AP35813 382 aa17■□□□□ 0.31
NUP50-219ENST00000497960 CAPSQ13938 189 aa17■□□□□ 0.31
NUP50-219ENST00000497960 LEXMQ3ZCV2 418 aa17■□□□□ 0.31
NUP50-219ENST00000497960 LONRF3Q496Y0 759 aa17■□□□□ 0.31
NUP50-219ENST00000497960 FOXD4L5Q5VV16 416 aaPredicted RBP17■□□□□ 0.31
NUP50-219ENST00000497960 KRT79Q5XKE5 535 aa17■□□□□ 0.31
NUP50-219ENST00000497960 PADI6Q6TGC4 694 aa17■□□□□ 0.31
NUP50-219ENST00000497960 KCNT2Q6UVM3 1135 aa17■□□□□ 0.31
NUP50-219ENST00000497960 DTHD1Q6ZMT9 781 aa17■□□□□ 0.31
NUP50-219ENST00000497960 SNX29Q8TEQ0 813 aa17■□□□□ 0.31
NUP50-219ENST00000497960 FOXD4L4Q8WXT5 416 aaPredicted RBP17■□□□□ 0.31
NUP50-219ENST00000497960 LPPQ93052 612 aa17■□□□□ 0.31
NUP50-219ENST00000497960 CCDC51Q96ER9 411 aa17■□□□□ 0.31
NUP50-219ENST00000497960 TLR9Q9NR96 1032 aa17■□□□□ 0.31
NUP50-219ENST00000497960 CLDND1Q9NY35 253 aa17■□□□□ 0.31
NUP50-219ENST00000497960 ARID2Q68CP9 1835 aa17■□□□□ 0.31
NUP50-219ENST00000497960 TCF20Q9UGU0 1960 aaKnown RBP16.99■□□□□ 0.31
NUP50-219ENST00000497960 LRRIQ4A6NIV6 560 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 TNFRSF10AO00220 468 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 CYP11B2P19099 503 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 IRS1P35568 1242 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 PLCB3Q01970 1234 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 KRT17Q04695 432 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 HYAL1Q12794 435 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 RESTQ13127 1097 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 NOTUMQ6P988 496 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 IGSF22Q8N9C0 903 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 NFKBIZQ9BYH8 718 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 IGFLR1Q9H665 355 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 GPRC5CQ9NQ84 441 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 SPG21Q9NZD8 308 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 KIAA1024Q9UPX6 916 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 LZTS1Q9Y250 596 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 INPP5FQ9Y2H2 1132 aa16.99■□□□□ 0.31
NUP50-219ENST00000497960 KIAA1671Q9BY89 1806 aa16.98■□□□□ 0.31
NUP50-219ENST00000497960 CARNS1A5YM72 827 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms