RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 TSGA10Q9BZW7 698 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 CYP39A1Q9NYL5 469 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 ARMCX3Q9UH62 379 aaPredicted RBP12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 PCDHB13Q9Y5F0 798 aa12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 ZC3H4Q9UPT8 1303 aaKnown RBP12.59□□□□□ -0.39
SNRNP200-208ENST00000497539 SIP14410 1827 aa12.58□□□□□ -0.39
SNRNP200-208ENST00000497539 KIAA1217Q5T5P2 1943 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 AGPSO00116 658 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 ICAM3P32942 547 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 RARRES1P49788 294 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 TUBB4BP68371 445 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 EFCAB13Q8IY85 973 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 COG1Q8WTW3 980 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 HDAC7Q8WUI4 952 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 HVCN1Q96D96 273 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 PCMTD1Q96MG8 357 aaPredicted RBP12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 CRACR2AQ9BSW2 395 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 ZHX3Q9H4I2 956 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 POLD4Q9HCU8 107 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 SUN2Q9UH99 717 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 SCN4AP35499 1836 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 MAPK13O15264 365 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 HIP1RO75146 1068 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 CCNE2O96020 404 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 AFPP02771 609 aaKnown RBP12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 NR3C2P08235 984 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 KCNA2P16389 499 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 ANXA13P27216 316 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 VGLL4Q14135 290 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 DNERQ8NFT8 737 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 THOC1Q96FV9 657 aaKnown RBP12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 SELENOOQ9BVL4 669 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 HOMER2Q9NSB8 354 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 CHCHD3Q9NX63 227 aaKnown RBP12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 SMARCAL1Q9NZC9 954 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 ARHGAP20Q9P2F6 1191 aa12.58□□□□□ -0.4
SNRNP200-208ENST00000497539 PJA2O43164 708 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 DKC1O60832 514 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 AKAP3O75969 853 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 CCT5P48643 541 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 VAV2P52735 878 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 HGSNATQ68CP4 663 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 FAM178BQ8IXR5 827 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 MICALL1Q8N3F8 863 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 ZC3H15Q8WU90 426 aaKnown RBP12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 MOV10L1Q9BXT6 1211 aaKnown RBP12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 AIPL1Q9NZN9 384 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 PFASO15067 1338 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 LRRC53A6NM62 1247 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 SPATA31C2B4DYI2 1134 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 ZBTB39O15060 712 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 PLS3P13797 630 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 AARSP49588 968 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 SLC7A5Q01650 507 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 PPATQ06203 517 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 KCNH2Q12809 1159 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 NSMFQ6X4W1 530 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 SLC35C1Q96A29 364 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 TMEM206Q9H813 350 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 MMRN2Q9H8L6 949 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 FAM207AQ9NSI2 230 aaPredicted RBP12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 FBXO40Q9UH90 709 aa12.57□□□□□ -0.4
SNRNP200-208ENST00000497539 A0A0G2JLL6 359 aaPredicted RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 STBD1O95210 358 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 NMT1P30419 496 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 YWHABP31946 246 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 PSMC2P35998 433 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 USP8P40818 1118 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 LIG3P49916 1009 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 NCKAP1LP55160 1127 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 PRAMEF18Q5VWM3 479 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 CCNI2Q6ZMN8 369 aaPredicted RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 PRRT2Q7Z6L0 340 aaPredicted RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 NCAPG2Q86XI2 1143 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 RIOX2Q8IUF8 465 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 DCPSQ96C86 337 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 LSM14BQ9BX40 385 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 FHDC1Q9C0D6 1143 aaPredicted RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 AGPAT3Q9NRZ7 376 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 TCEAL9Q9UHQ7 104 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 CXCL11O14625 94 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 ATP9AO75110 1047 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 RGS20O76081 388 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 SERPING1P05155 500 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 XRCC5P13010 732 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 CXCR5P32302 372 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 RTP1P59025 263 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 GTF2BQ00403 316 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 ENPEPQ07075 957 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 ODR4Q5SWX8 454 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 USP50Q70EL3 339 aaPredicted RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 NME8Q8N427 588 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 EHD2Q9NZN4 543 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 LARSQ9P2J5 1176 aaKnown RBP12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 BLOC1S6Q9UL45 172 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 KCNH4Q9UQ05 1017 aa12.56□□□□□ -0.4
SNRNP200-208ENST00000497539 ANO9A1A5B4 782 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 KRT86O43790 486 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms