RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 MSRAQ9UJ68 235 aa5.35□□□□□ -1.55
CD46-218ENST00000496723 CAPN14A8MX76 684 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 NEMP1O14524 444 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 BPIP17213 487 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 LSP1P33241 339 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 BCAR1P56945 870 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 ANTXR2P58335 489 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 PHC1P78364 1004 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 TERF2Q15554 542 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 DDB1Q16531 1140 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 DGKDQ16760 1214 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 GPR158Q5T848 1215 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 UNQ6494/PRO21346Q6UXR6 183 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 ANKRD35Q8N283 1001 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 ZNF610Q8N9Z0 462 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 OR5AN1Q8NGI8 311 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 LPPQ93052 612 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 ZG16BQ96DA0 208 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 ZNF496Q96IT1 587 aaPredicted RBP5.34□□□□□ -1.55
CD46-218ENST00000496723 TTC1Q99614 292 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 MS4A5Q9H3V2 200 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 IFT22Q9H7X7 185 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 KCMF1Q9P0J7 381 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 SAE1Q9UBE0 346 aaPredicted RBP5.34□□□□□ -1.55
CD46-218ENST00000496723 FAM184BQ9ULE4 1060 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 VWA7Q9Y334 891 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 PRKAB1Q9Y478 270 aa5.34□□□□□ -1.55
CD46-218ENST00000496723 LCHNA4D1U4 455 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 RAB11FIP3O75154 756 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 TGM1P22735 817 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 CNGA1P29973 690 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 ID4P47928 161 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 BROXQ5VW32 411 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 KIAA1841Q6NSI8 718 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 ESPNLQ6ZVH7 1005 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 KANSL1Q7Z3B3 1105 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 OR14K1Q8NGZ2 314 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 SLC5A5Q92911 643 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 USP36Q9P275 1121 aaKnown RBP5.33□□□□□ -1.56
CD46-218ENST00000496723 REXO2Q9Y3B8 237 aaKnown RBP5.33□□□□□ -1.56
CD46-218ENST00000496723 DMRT1Q9Y5R6 373 aa5.33□□□□□ -1.56
CD46-218ENST00000496723 ELL2O00472 640 aaPredicted RBP5.32□□□□□ -1.56
CD46-218ENST00000496723 ZEB2O60315 1214 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 RAMP2O60895 175 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 ADAM15Q13444 863 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 RRP1BQ14684 758 aaKnown RBP5.32□□□□□ -1.56
CD46-218ENST00000496723 SPTY2D1Q68D10 685 aaPredicted RBP5.32□□□□□ -1.56
CD46-218ENST00000496723 KLHDC10Q6PID8 442 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 PCSK4Q6UW60 755 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 KRT26Q7Z3Y9 468 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 BMP8AQ7Z5Y6 402 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 RABGGTAQ92696 567 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 CLIP3Q96DZ5 547 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 DYDC2Q96IM9 177 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 CRAMP1Q96RY5 1269 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 MTG2Q9H4K7 406 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 AGO3Q9H9G7 860 aaKnown RBP5.32□□□□□ -1.56
CD46-218ENST00000496723 DENND2AQ9ULE3 1009 aa5.32□□□□□ -1.56
CD46-218ENST00000496723 CADPSQ9ULU8 1353 aa5.31□□□□□ -1.56
CD46-218ENST00000496723 MAFGO15525 162 aa5.31□□□□□ -1.56
CD46-218ENST00000496723 VIL1P09327 827 aaKnown RBP5.31□□□□□ -1.56
CD46-218ENST00000496723 SESN2P58004 480 aaPredicted RBP5.31□□□□□ -1.56
CD46-218ENST00000496723 CRHR2Q13324 411 aa5.31□□□□□ -1.56
CD46-218ENST00000496723 ZNF662Q6ZS27 426 aa5.31□□□□□ -1.56
CD46-218ENST00000496723 FRMD7Q6ZUT3 714 aa5.31□□□□□ -1.56
CD46-218ENST00000496723 ZNF627Q7L945 461 aa5.31□□□□□ -1.56
CD46-218ENST00000496723 HDGFL2Q7Z4V5 671 aaPredicted RBP5.31□□□□□ -1.56
CD46-218ENST00000496723 AFAP1L2Q8N4X5 818 aa5.31□□□□□ -1.56
CD46-218ENST00000496723 FERMT2Q96AC1 680 aa5.31□□□□□ -1.56
CD46-218ENST00000496723 TMEM176AQ96HP8 235 aa5.31□□□□□ -1.56
CD46-218ENST00000496723 AGAP2Q99490 1192 aa5.31□□□□□ -1.56
CD46-218ENST00000496723 PITHD1Q9GZP4 211 aaPredicted RBP5.31□□□□□ -1.56
CD46-218ENST00000496723 APOBEC2Q9Y235 224 aaKnown RBP5.31□□□□□ -1.56
CD46-218ENST00000496723 NOC2LQ9Y3T9 749 aaKnown RBP5.31□□□□□ -1.56
CD46-218ENST00000496723 SBNO2Q9Y2G9 1366 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 A0A0A6YYJ9 748 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 ST20-MTHFSA0A0A6YYL1 179 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.3□□□□□ -1.56
CD46-218ENST00000496723 TMEM191CA6NGB0 347 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 KDM1AO60341 852 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 BRINP1O60477 761 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 OPHN1O60890 802 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 H2AFYO75367 372 aaKnown RBP5.3□□□□□ -1.56
CD46-218ENST00000496723 ULK1O75385 1050 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 PCDH8O95206 1070 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 RIN1Q13671 783 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 ZBTB41Q5SVQ8 909 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 RASSF3Q86WH2 238 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 NKD2Q969F2 451 aaPredicted RBP5.3□□□□□ -1.56
CD46-218ENST00000496723 GFM2Q969S9 779 aaKnown RBP5.3□□□□□ -1.56
CD46-218ENST00000496723 WDR92Q96MX6 357 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 NOL10Q9BSC4 688 aaKnown RBP5.3□□□□□ -1.56
CD46-218ENST00000496723 ANO3Q9BYT9 981 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 HAPLN2Q9GZV7 340 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 TMX1Q9H3N1 280 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 POLR3BQ9NW08 1133 aaPredicted RBP5.3□□□□□ -1.56
CD46-218ENST00000496723 HECAQ9UBI9 543 aaPredicted RBP5.3□□□□□ -1.56
CD46-218ENST00000496723 DNAI1Q9UI46 699 aa5.3□□□□□ -1.56
CD46-218ENST00000496723 SYNPO2Q9UMS6 1093 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms