RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 TSPAN1O60635 241 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 TFDP1Q14186 410 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 CDCA2Q69YH5 1023 aaPredicted RBP17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 LRRC55Q6ZSA7 311 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 DAW1Q8N136 415 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 USP28Q96RU2 1077 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 RUSC1Q9BVN2 902 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 CWH43Q9H720 699 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 PRDM6Q9NQX0 595 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 DACT1Q9NYF0 836 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 DNM3Q9UQ16 869 aa17.89■□□□□ 0.45
DNMT3A-215ENST00000496570 ZNF623O75123 536 aa17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 EOMESO95936 686 aa17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 CTNNB1P35222 781 aa17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 MAPK7Q13164 816 aa17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 PKP1Q13835 747 aa17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 CCDC85BQ15834 202 aaPredicted RBP17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 C1orf186Q6ZWK4 172 aa17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 AK8Q96MA6 479 aa17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 PLIN2Q99541 437 aa17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 TMEM117Q9H0C3 514 aa17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 ZSCAN16Q9H4T2 348 aaPredicted RBP17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 FAM105AQ9NUU6 356 aa17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 LMCD1Q9NZU5 365 aa17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 FBXO2Q9UK22 296 aaPredicted RBP17.88■□□□□ 0.45
DNMT3A-215ENST00000496570 A0A0C4DFX4 3053 aa17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 B4GALT5O43286 388 aa17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 EDN1P05305 212 aa17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 RB1P06400 928 aa17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 LONP1P36776 959 aaKnown RBP17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 GPM6BQ13491 265 aa17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 PCBP1Q15365 356 aaKnown RBP eCLIP17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 TWF2Q6IBS0 349 aaKnown RBP17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 RINT1Q6NUQ1 792 aa17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 USP49Q70CQ1 688 aa17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 CABP7Q86V35 215 aa17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 PPM1EQ8WY54 764 aa17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 LPPQ93052 612 aa17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 TYW1Q9NV66 732 aaKnown RBP17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 RWDD3Q9Y3V2 267 aa17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 MORC2Q9Y6X9 1032 aaPredicted RBP17.87■□□□□ 0.45
DNMT3A-215ENST00000496570 TTLL13PA6NNM8 815 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 INO80B-WBP1J3KQ70 363 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 GRM6O15303 877 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 ARF4P18085 180 aaPredicted RBP17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 MARCKSP29966 332 aaPredicted RBP17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 SLC12A3P55017 1021 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 CAMK1Q14012 370 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 ZRSR1Q15695 479 aaKnown RBP17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 MRPL10Q7Z7H8 261 aaKnown RBP17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 KCTD17Q8N5Z5 321 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 SYT2Q8N9I0 419 aaPredicted RBP17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 SPRYD3Q8NCJ5 442 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 RNF169Q8NCN4 708 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 HELQQ8TDG4 1101 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 CPB2Q96IY4 423 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 EIF2AQ9BY44 585 aaKnown RBP17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 CCDC113Q9H0I3 377 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 NT5C3AQ9H0P0 336 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 CSRNP2Q9H175 543 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 FZD8Q9H461 694 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 BLOC1S4Q9NUP1 217 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 PCDHB2Q9Y5E7 798 aa17.86■□□□□ 0.45
DNMT3A-215ENST00000496570 LRRIQ4A6NIV6 560 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 SLC26A4O43511 780 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 GTPBP6O43824 516 aaPredicted RBP17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 ITGB1P05556 798 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 AXLP30530 894 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 NAMPTP43490 491 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 NASPP49321 788 aaPredicted RBP17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 RAB27AP51159 221 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 CEBPZQ03701 1054 aaKnown RBP17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 SLC39A14Q15043 492 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 LONRF3Q496Y0 759 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 SPECC1Q5M775 1068 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 PPP4R3CPQ6ZMV5 832 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 AGMOQ6ZNB7 445 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 MICALL1Q8N3F8 863 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 SMG8Q8ND04 991 aaKnown RBP17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 KIFAP3Q92845 792 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 P2RX5Q93086 422 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 MRPL38Q96DV4 380 aaKnown RBP17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 EPSTI1Q96J88 318 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 KIFC3Q9BVG8 833 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 PLVAPQ9BX97 442 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 PLXNA4Q9HCM2 1894 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 PLAGL2Q9UPG8 496 aa17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 SRPRBQ9Y5M8 271 aaKnown RBP17.85■□□□□ 0.45
DNMT3A-215ENST00000496570 HOXA2O43364 376 aa17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 HIP1RO75146 1068 aa17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 ERLIN2O94905 339 aa17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 GUCY2CP25092 1073 aa17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 DNAJB1P25685 340 aa17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 KARSQ15046 597 aaKnown RBP17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 FAM187BQ17R55 369 aa17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 ARSHQ5FYA8 562 aa17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 KLHL23Q8NBE8 558 aa17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 COLGALT1Q8NBJ5 622 aa17.84■□□□□ 0.45
DNMT3A-215ENST00000496570 CLIC6Q96NY7 704 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms