RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 CA3P07451 260 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 CKBP12277 381 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 CALCRLQ16602 461 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 C9orf50Q5SZB4 431 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 NEK8Q86SG6 692 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 TMEM139Q8IV31 216 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 NOC3LQ8WTT2 800 aaKnown RBP9.37□□□□□ -0.91
VPS13B-206ENST00000496144 CEP170P1Q96L14 293 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 GCNAQ96QF7 691 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 HINFPQ9BQA5 517 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 MAGEF1Q9HAY2 307 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 GAS2O43903 313 aaKnown RBP9.37□□□□□ -0.91
VPS13B-206ENST00000496144 RFC5P40937 340 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 PTPN14Q15678 1187 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 NAALADL2Q58DX5 795 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 MORC4Q8TE76 937 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 CLEC4DQ8WXI8 215 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 AK8Q96MA6 479 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 PPP1R16BQ96T49 567 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 TBX21Q9UL17 535 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 GNEQ9Y223 722 aaKnown RBP9.37□□□□□ -0.91
VPS13B-206ENST00000496144 NFASCO94856 1347 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 TBCAO75347 108 aaKnown RBP9.36□□□□□ -0.91
VPS13B-206ENST00000496144 CDK11BP21127 795 aaKnown RBP9.36□□□□□ -0.91
VPS13B-206ENST00000496144 USP11P51784 963 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 RBM10P98175 930 aaKnown RBP9.36□□□□□ -0.91
VPS13B-206ENST00000496144 GDF6Q6KF10 455 aaPredicted RBP9.36□□□□□ -0.91
VPS13B-206ENST00000496144 PSPC1Q8WXF1 523 aaKnown RBP9.36□□□□□ -0.91
VPS13B-206ENST00000496144 EMID1Q96A84 441 aaPredicted RBP9.36□□□□□ -0.91
VPS13B-206ENST00000496144 CTAGE1Q96RT6 745 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 LRRC27Q9C0I9 530 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 KIF2AO00139 706 aaPredicted RBP9.36□□□□□ -0.91
VPS13B-206ENST00000496144 URODP06132 367 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 ABCD1P33897 745 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 PBX1P40424 430 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 SEMA3FQ13275 785 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 XKR3Q5GH77 459 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 KRT79Q5XKE5 535 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 SIAH1Q8IUQ4 282 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 MFSD14AQ96MC6 490 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 PRRX2Q99811 253 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 PLVAPQ9BX97 442 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.36□□□□□ -0.91
VPS13B-206ENST00000496144 KARSQ15046 597 aaKnown RBP9.36□□□□□ -0.91
VPS13B-206ENST00000496144 TMEM31Q5JXX7 168 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 SPECC1LQ69YQ0 1117 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 PLPPR4Q7Z2D5 763 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 SMYD4Q8IYR2 804 aaPredicted RBP9.36□□□□□ -0.91
VPS13B-206ENST00000496144 LRRC43Q8N309 656 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 CCSER1Q9C0I3 900 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 C2orf40Q9H1Z8 148 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 CUEDC2Q9H467 287 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 OR52Z1P0C646 297 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 PDXDC1Q6P996 788 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 ATP8B4Q8TF62 1192 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 NACC1Q96RE7 527 aa9.36□□□□□ -0.91
VPS13B-206ENST00000496144 CELF4Q9BZC1 486 aaKnown RBP9.36□□□□□ -0.91
VPS13B-206ENST00000496144 ITIH6Q6UXX5 1313 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 NRDCO43847 1150 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 TUBB4AP04350 444 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 PSMC5P62195 406 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 SESTD1Q86VW0 696 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 LRRC15Q8TF66 581 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 PIN4Q9Y237 131 aaKnown RBP9.35□□□□□ -0.91
VPS13B-206ENST00000496144 ARHGAP1Q07960 439 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 GOLGA8FQ08AF8 430 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 GOLGA8DPQ0D2H9 430 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 SMC1AQ14683 1233 aaKnown RBP9.35□□□□□ -0.91
VPS13B-206ENST00000496144 KCNB1Q14721 858 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 RRAGBQ5VZM2 374 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 TPH2Q8IWU9 490 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 ANKRD7Q92527 254 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 TRMT1Q9NXH9 659 aaKnown RBP9.35□□□□□ -0.91
VPS13B-206ENST00000496144 LIMA1Q9UHB6 759 aaKnown RBP9.35□□□□□ -0.91
VPS13B-206ENST00000496144 SMIM35A0A1B0GVV1 85 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 CLK2P49760 499 aaKnown RBP9.35□□□□□ -0.91
VPS13B-206ENST00000496144 PAK1Q13153 545 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 ZNF618Q5T7W0 954 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 LIN9Q5TKA1 542 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 MTERF4Q7Z6M4 381 aaKnown RBP9.35□□□□□ -0.91
VPS13B-206ENST00000496144 TMEM192Q8IY95 271 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-206ENST00000496144 NLRP4Q96MN2 994 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 CDCA3Q99618 268 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-206ENST00000496144 TMEM260Q9NX78 707 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 ITGA4P13612 1032 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 INSRRP14616 1297 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 PTPN21Q16825 1174 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 EFCAB12Q6NXP0 572 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 NELFBQ8WX92 580 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 KCNH7Q9NS40 1196 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 PP2D1A8MPX8 630 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 INO80B-WBP1J3KQ70 363 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 PIK3CDO00329 1044 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 PPP2R5DQ14738 602 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 CABP7Q86V35 215 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 YAF2Q8IY57 180 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 TC2NQ8N9U0 490 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 ADAMTS19Q8TE59 1207 aa9.35□□□□□ -0.91
VPS13B-206ENST00000496144 MTMR8Q96EF0 704 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms