RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 HIPK4Q8NE63 616 aa4.05□□□□□ -1.76
PHC3-215ENST00000495893 MNTQ99583 582 aa4.05□□□□□ -1.76
PHC3-215ENST00000495893 TRIM51Q9BSJ1 452 aa4.05□□□□□ -1.76
PHC3-215ENST00000495893 HMG20AQ9NP66 347 aa4.05□□□□□ -1.76
PHC3-215ENST00000495893 IARS2Q9NSE4 1012 aaKnown RBP4.05□□□□□ -1.76
PHC3-215ENST00000495893 UBN2Q6ZU65 1347 aa4.05□□□□□ -1.76
PHC3-215ENST00000495893 VWA3AA6NCI4 1184 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 KRT87PA6NCN2 255 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 PFKFB2O60825 505 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 STAM2O75886 525 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 HSPA4LO95757 839 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 IGHDP01880 384 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 RPS6KB1P23443 525 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 TMPRSS15P98073 1019 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 SLC9A5Q14940 896 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 KLHL38Q2WGJ6 581 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 USH1GQ495M9 461 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 RBM20Q5T481 1227 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 ZNF554Q86TJ5 538 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 SETD3Q86TU7 594 aaPredicted RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 UPF1Q92900 1129 aaKnown RBP eCLIP4.04□□□□□ -1.76
PHC3-215ENST00000495893 DGCR14Q96DF8 476 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 VCPKMTQ9H867 229 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 DAPK2Q9UIK4 370 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 RWDD2AQ9UIY3 292 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 TMCO1Q9UM00 188 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 USP15Q9Y4E8 981 aaPredicted RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 SNTNA6NMZ2 147 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 IFIT5Q13325 482 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 BRDTQ58F21 947 aaPredicted RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 U2AF1L4Q8WU68 220 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 WWP1Q9H0M0 922 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 FBXO9Q9UK97 447 aaPredicted RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 KDM3AQ9Y4C1 1321 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 TSC22D2O75157 780 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 TGFBR2P37173 567 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 MAGOHP61326 146 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 HDLBPQ00341 1268 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 DR1Q01658 176 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 SREBF2Q12772 1141 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 CSTF3Q12996 717 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 TAF1BQ53T94 588 aaPredicted RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 CLEC4GQ6UXB4 293 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 ARHGEF25Q86VW2 580 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 TRIM50Q86XT4 487 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 GATAD2AQ86YP4 633 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 PM20D2Q8IYS1 436 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 SYTL5Q8TDW5 730 aaPredicted RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 TESK2Q96S53 571 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 CCT8L2Q96SF2 557 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 EPC1Q9H2F5 836 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 FAM153AQ9UHL3 310 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 MTO1Q9Y2Z2 717 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 VWA5AO00534 786 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 COPEO14579 308 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 PSTPIP1O43586 416 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 POLR2BP30876 1174 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 EHHADHQ08426 723 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 SEMA3FQ13275 785 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 HIF1AQ16665 826 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 C2CD6Q53TS8 623 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 RC3H1Q5TC82 1133 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 CYGBQ8WWM9 190 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 DHX38Q92620 1227 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 EME1Q96AY2 570 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 TMEM106CQ9BVX2 250 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 BBS2Q9BXC9 721 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 HBS1LQ9Y450 684 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 SYNGAP1Q96PV0 1343 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 SGK1O00141 431 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 KRT38O76015 456 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 KLHL2O95198 593 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 CLPTM1O96005 669 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 RAB25P57735 213 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 KMT5BQ4FZB7 885 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 FAM178BQ8IXR5 827 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 METTL14Q9HCE5 456 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 GAS7O60861 476 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 PTCD1O75127 700 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 ANP32DO95626 131 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 ZSCAN20P17040 1043 aaPredicted RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 RGS2P41220 211 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 HAND2P61296 217 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 KCNA1Q09470 495 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 ZNF280DQ6N043 979 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 CYB5D1Q6P9G0 228 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 B3GNT6Q6ZMB0 384 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 DEPDC1BQ8WUY9 529 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 MIEF2Q96C03 454 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 CEP44Q9C0F1 390 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 TIMMDC1Q9NPL8 285 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 NFKBIL1Q9UBC1 381 aaPredicted RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 HACL1Q9UJ83 578 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 NPC1L1Q9UHC9 1359 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 TLR3O15455 904 aaKnown RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 C15orf59Q2T9L4 293 aaPredicted RBP4.04□□□□□ -1.76
PHC3-215ENST00000495893 RABGAP1LQ5R372 815 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 ARMC4Q5T2S8 1044 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 AGBL2Q5U5Z8 902 aa4.04□□□□□ -1.76
PHC3-215ENST00000495893 TRIQKQ629K1 86 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms