RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ADAM15Q13444 863 aa26.98■■□□□ 1.91
HLA-C-209ENST00000495835 TFDP1Q14186 410 aa26.98■■□□□ 1.91
HLA-C-209ENST00000495835 TTC38Q5R3I4 469 aa26.98■■□□□ 1.91
HLA-C-209ENST00000495835 PTCRAQ6ISU1 281 aaPredicted RBP26.98■■□□□ 1.91
HLA-C-209ENST00000495835 KCNT2Q6UVM3 1135 aa26.98■■□□□ 1.91
HLA-C-209ENST00000495835 IFNLR1Q8IU57 520 aaPredicted RBP26.98■■□□□ 1.91
HLA-C-209ENST00000495835 RNF149Q8NC42 400 aa26.98■■□□□ 1.91
HLA-C-209ENST00000495835 RNF169Q8NCN4 708 aa26.98■■□□□ 1.91
HLA-C-209ENST00000495835 ERMNQ8TAM6 284 aa26.98■■□□□ 1.91
HLA-C-209ENST00000495835 PGBD4Q96DM1 585 aa26.98■■□□□ 1.91
HLA-C-209ENST00000495835 ZNF558Q96NG5 402 aa26.98■■□□□ 1.91
HLA-C-209ENST00000495835 TLR9Q9NR96 1032 aa26.98■■□□□ 1.91
HLA-C-209ENST00000495835 POTEMA6NI47 508 aa26.97■■□□□ 1.91
HLA-C-209ENST00000495835 SPATA31C1P0DKV0 1188 aa26.97■■□□□ 1.91
HLA-C-209ENST00000495835 AXLP30530 894 aa26.97■■□□□ 1.91
HLA-C-209ENST00000495835 LTBRP36941 435 aa26.97■■□□□ 1.91
HLA-C-209ENST00000495835 ZNF174Q15697 407 aa26.97■■□□□ 1.91
HLA-C-209ENST00000495835 CATSPER3Q86XQ3 398 aa26.97■■□□□ 1.91
HLA-C-209ENST00000495835 MRPS27Q92552 414 aaKnown RBP26.97■■□□□ 1.91
HLA-C-209ENST00000495835 NECAB3Q96P71 396 aaPredicted RBP26.97■■□□□ 1.91
HLA-C-209ENST00000495835 NACC1Q96RE7 527 aa26.97■■□□□ 1.91
HLA-C-209ENST00000495835 NFKBIZQ9BYH8 718 aa26.97■■□□□ 1.91
HLA-C-209ENST00000495835 DBR1Q9UK59 544 aaKnown RBP26.97■■□□□ 1.91
HLA-C-209ENST00000495835 RPA1P27694 616 aa26.96■■□□□ 1.91
HLA-C-209ENST00000495835 TECP42680 631 aa26.96■■□□□ 1.91
HLA-C-209ENST00000495835 PTENP60484 403 aa26.96■■□□□ 1.91
HLA-C-209ENST00000495835 KRT17Q04695 432 aa26.96■■□□□ 1.91
HLA-C-209ENST00000495835 EFHBQ8N7U6 833 aa26.96■■□□□ 1.91
HLA-C-209ENST00000495835 HELQQ8TDG4 1101 aa26.96■■□□□ 1.91
HLA-C-209ENST00000495835 SPG21Q9NZD8 308 aa26.96■■□□□ 1.91
HLA-C-209ENST00000495835 STK24Q9Y6E0 443 aa26.96■■□□□ 1.91
HLA-C-209ENST00000495835 H3BQ06 376 aaPredicted RBP26.95■■□□□ 1.9
HLA-C-209ENST00000495835 HOXA11P31270 313 aaPredicted RBP26.95■■□□□ 1.9
HLA-C-209ENST00000495835 IRS1P35568 1242 aa26.95■■□□□ 1.9
HLA-C-209ENST00000495835 ARL2P36404 184 aa26.95■■□□□ 1.9
HLA-C-209ENST00000495835 NCBP1Q09161 790 aaKnown RBP26.95■■□□□ 1.9
HLA-C-209ENST00000495835 PDIA5Q14554 519 aa26.95■■□□□ 1.9
HLA-C-209ENST00000495835 GLB1LQ6UWU2 654 aa26.95■■□□□ 1.9
HLA-C-209ENST00000495835 EP400NLQ6ZTU2 488 aa26.95■■□□□ 1.9
HLA-C-209ENST00000495835 MRPL10Q7Z7H8 261 aaKnown RBP26.95■■□□□ 1.9
HLA-C-209ENST00000495835 FAM178BQ8IXR5 827 aa26.95■■□□□ 1.9
HLA-C-209ENST00000495835 CNNM3Q8NE01 707 aa26.95■■□□□ 1.9
HLA-C-209ENST00000495835 MICAL1Q8TDZ2 1067 aa26.95■■□□□ 1.9
HLA-C-209ENST00000495835 PIGOQ8TEQ8 1089 aa26.95■■□□□ 1.9
HLA-C-209ENST00000495835 CDCA3Q99618 268 aaPredicted RBP26.95■■□□□ 1.9
HLA-C-209ENST00000495835 MINDY3Q9H8M7 445 aa26.95■■□□□ 1.9
HLA-C-209ENST00000495835 HCSTQ9UBK5 93 aa26.95■■□□□ 1.9
HLA-C-209ENST00000495835 ALDH7A1P49419 539 aaKnown RBP26.94■■□□□ 1.9
HLA-C-209ENST00000495835 FXR2P51116 673 aaKnown RBP eCLIP26.94■■□□□ 1.9
HLA-C-209ENST00000495835 C4orf32Q8N8J7 132 aa26.94■■□□□ 1.9
HLA-C-209ENST00000495835 MCPH1Q8NEM0 835 aa26.94■■□□□ 1.9
HLA-C-209ENST00000495835 CCDC51Q96ER9 411 aa26.94■■□□□ 1.9
HLA-C-209ENST00000495835 TMX3Q96JJ7 454 aa26.94■■□□□ 1.9
HLA-C-209ENST00000495835 IGFLR1Q9H665 355 aa26.94■■□□□ 1.9
HLA-C-209ENST00000495835 NGRNQ9NPE2 291 aaKnown RBP26.94■■□□□ 1.9
HLA-C-209ENST00000495835 BMP2KQ9NSY1 1161 aaPredicted RBP26.94■■□□□ 1.9
HLA-C-209ENST00000495835 PRKAG3Q9UGI9 489 aa26.94■■□□□ 1.9
HLA-C-209ENST00000495835 CNTNAP2Q9UHC6 1331 aa26.93■■□□□ 1.9
HLA-C-209ENST00000495835 LAD1O00515 517 aa26.93■■□□□ 1.9
HLA-C-209ENST00000495835 FSCN2O14926 492 aa26.93■■□□□ 1.9
HLA-C-209ENST00000495835 ERLIN2O94905 339 aa26.93■■□□□ 1.9
HLA-C-209ENST00000495835 HAUS3Q68CZ6 603 aa26.93■■□□□ 1.9
HLA-C-209ENST00000495835 UBN1Q9NPG3 1134 aa26.93■■□□□ 1.9
HLA-C-209ENST00000495835 PCDHB2Q9Y5E7 798 aa26.93■■□□□ 1.9
HLA-C-209ENST00000495835 MED24O75448 989 aa26.92■■□□□ 1.9
HLA-C-209ENST00000495835 ERVFC1P60507 584 aa26.92■■□□□ 1.9
HLA-C-209ENST00000495835 NOMO2Q5JPE7 1267 aa26.92■■□□□ 1.9
HLA-C-209ENST00000495835 ADGRD2Q7Z7M1 963 aa26.92■■□□□ 1.9
HLA-C-209ENST00000495835 TBC1D32Q96NH3 1257 aa26.92■■□□□ 1.9
HLA-C-209ENST00000495835 RAB34Q9BZG1 259 aa26.92■■□□□ 1.9
HLA-C-209ENST00000495835 TLE6Q9H808 572 aa26.92■■□□□ 1.9
HLA-C-209ENST00000495835 KANSL3Q9P2N6 904 aa26.92■■□□□ 1.9
HLA-C-209ENST00000495835 DAXXQ9UER7 740 aaPredicted RBP26.92■■□□□ 1.9
HLA-C-209ENST00000495835 OFD1O75665 1012 aa26.91■■□□□ 1.9
HLA-C-209ENST00000495835 IL9P15248 144 aa26.91■■□□□ 1.9
HLA-C-209ENST00000495835 NRIP1P48552 1158 aa26.91■■□□□ 1.9
HLA-C-209ENST00000495835 CAPSQ13938 189 aa26.91■■□□□ 1.9
HLA-C-209ENST00000495835 SLC39A11Q8N1S5 342 aa26.91■■□□□ 1.9
HLA-C-209ENST00000495835 NCLP19338 710 aaKnown RBP26.9■■□□□ 1.9
HLA-C-209ENST00000495835 GLRA2P23416 452 aa26.9■■□□□ 1.9
HLA-C-209ENST00000495835 GTF2F1P35269 517 aaKnown RBP eCLIP26.9■■□□□ 1.9
HLA-C-209ENST00000495835 BCAR1P56945 870 aa26.9■■□□□ 1.9
HLA-C-209ENST00000495835 UBXN11Q5T124 520 aa26.9■■□□□ 1.9
HLA-C-209ENST00000495835 NOTUMQ6P988 496 aa26.9■■□□□ 1.9
HLA-C-209ENST00000495835 LPPQ93052 612 aa26.9■■□□□ 1.9
HLA-C-209ENST00000495835 MSLNLQ96KJ4 702 aa26.9■■□□□ 1.9
HLA-C-209ENST00000495835 STK39Q9UEW8 545 aa26.9■■□□□ 1.9
HLA-C-209ENST00000495835 CD207Q9UJ71 328 aa26.9■■□□□ 1.9
HLA-C-209ENST00000495835 INO80B-WBP1J3KQ70 363 aa26.89■■□□□ 1.9
HLA-C-209ENST00000495835 TBX10O75333 385 aa26.89■■□□□ 1.9
HLA-C-209ENST00000495835 EYA4O95677 639 aa26.89■■□□□ 1.9
HLA-C-209ENST00000495835 PRPHP41219 470 aa26.89■■□□□ 1.9
HLA-C-209ENST00000495835 NDUFV1P49821 464 aa26.89■■□□□ 1.9
HLA-C-209ENST00000495835 TOB1P50616 345 aaPredicted RBP26.89■■□□□ 1.9
HLA-C-209ENST00000495835 DLX2Q07687 328 aaPredicted RBP26.89■■□□□ 1.9
HLA-C-209ENST00000495835 SMAD4Q13485 552 aaKnown RBP26.89■■□□□ 1.9
HLA-C-209ENST00000495835 BMS1Q14692 1282 aaKnown RBP26.89■■□□□ 1.9
HLA-C-209ENST00000495835 SMAD2Q15796 467 aaKnown RBP26.89■■□□□ 1.9
HLA-C-209ENST00000495835 AGMOQ6ZNB7 445 aa26.89■■□□□ 1.9
HLA-C-209ENST00000495835 IGSF22Q8N9C0 903 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms