RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 GOLGA6AQ9NYA3 693 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 KCMF1Q9P0J7 381 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 VWA7Q9Y334 891 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 PCDHGA9Q9Y5G4 932 aaKnown RBP7.66□□□□□ -1.18
CCDC39-207ENST00000495817 PCDHGA8Q9Y5G5 932 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 PCDHGA7Q9Y5G6 932 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 PCDHGA6Q9Y5G7 932 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 PCDHGA3Q9Y5H0 932 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 PCDHGA2Q9Y5H1 932 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 CCDC194A0A1B0GVG4 234 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 KRTAP9-7A8MTY7 169 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 B8ZZF3 427 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 NCANO14594 1321 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 SESN2P58004 480 aaPredicted RBP7.65□□□□□ -1.18
CCDC39-207ENST00000495817 NFYCQ13952 458 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 MLC1Q15049 377 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 LCE1DQ5T752 114 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 EFCAB2Q5VUJ9 269 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 PRAMEF9Q5VWM5 478 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 CCSAPQ6IQ19 270 aaPredicted RBP7.65□□□□□ -1.18
CCDC39-207ENST00000495817 RTKN2Q8IZC4 609 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 TTC8Q8TAM2 541 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 SEMA4AQ9H3S1 761 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 JADE2Q9NQC1 790 aa7.65□□□□□ -1.18
CCDC39-207ENST00000495817 XPOTO43592 962 aaKnown RBP7.64□□□□□ -1.19
CCDC39-207ENST00000495817 PRPF6O94906 941 aaKnown RBP7.64□□□□□ -1.19
CCDC39-207ENST00000495817 MTHFD2P13995 350 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 ATF3P18847 181 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 RGS3P49796 1198 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 EFEMP1Q12805 493 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 ODF1Q14990 250 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 UGT8Q16880 541 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 AGBL4Q5VU57 503 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 KANSL1Q7Z3B3 1105 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 C14orf80Q86SX3 495 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 OR5AN1Q8NGI8 311 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 TGFBRAP1Q8WUH2 860 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 RAX2Q96IS3 184 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 SAMD11Q96NU1 681 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 MYL10Q9BUA6 226 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 ANO3Q9BYT9 981 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 MEGF9Q9H1U4 602 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 OR10A2Q9H208 303 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 POFUT1Q9H488 388 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 ZNF277Q9NRM2 450 aaPredicted RBP7.64□□□□□ -1.19
CCDC39-207ENST00000495817 DNAJC28Q9NX36 388 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 PPP4R1LQ9P1A2 415 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 NOB1Q9ULX3 412 aaKnown RBP7.64□□□□□ -1.19
CCDC39-207ENST00000495817 PPP2R3BQ9Y5P8 575 aa7.64□□□□□ -1.19
CCDC39-207ENST00000495817 NPEPPSL1A6NEC2 478 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 ELL2O00472 640 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-207ENST00000495817 PRRG2O14669 202 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 PF4V1P10720 104 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 CYP2C19P33261 490 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 MTNR1BP49286 362 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 RAC3P60763 192 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 MRPS9P82933 396 aaKnown RBP7.63□□□□□ -1.19
CCDC39-207ENST00000495817 GTF2H3Q13889 308 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 MYBPC3Q14896 1274 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 CLUL1Q15846 466 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 DGKDQ16760 1214 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 KIAA1841Q6NSI8 718 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 BMP8AQ7Z5Y6 402 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 CIR1Q86X95 450 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-207ENST00000495817 RSAD2Q8WXG1 361 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 LPPQ93052 612 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 FERMT2Q96AC1 680 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 HSPBAP1Q96EW2 488 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 SSBP3Q9BWW4 388 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-207ENST00000495817 SAE1Q9UBE0 346 aaPredicted RBP7.63□□□□□ -1.19
CCDC39-207ENST00000495817 GABBR1Q9UBS5 961 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 CDC42EP3Q9UKI2 254 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 PTPN22Q9Y2R2 807 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 GPR45Q9Y5Y3 372 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 NUMBLQ9Y6R0 609 aa7.63□□□□□ -1.19
CCDC39-207ENST00000495817 PRSS38A1L453 326 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 ARHGAP6O43182 974 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 AGXTP21549 392 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 GNALP38405 381 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 MRE11P49959 708 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 RRADP55042 308 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 ACAP2Q15057 778 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.62□□□□□ -1.19
CCDC39-207ENST00000495817 GFOD2Q3B7J2 385 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 SPATS1Q496A3 300 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 CT83Q5H943 113 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 KCNK18Q7Z418 384 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 CCAR1Q8IX12 1150 aaKnown RBP7.62□□□□□ -1.19
CCDC39-207ENST00000495817 JADE3Q92613 823 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 TEKT5Q96M29 485 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 AIFM3Q96NN9 605 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 LMF1Q96S06 567 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 PITHD1Q9GZP4 211 aaPredicted RBP7.62□□□□□ -1.19
CCDC39-207ENST00000495817 HAPLN2Q9GZV7 340 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 SLC52A1Q9NWF4 448 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 NR2E1Q9Y466 385 aa7.62□□□□□ -1.19
CCDC39-207ENST00000495817 ST20-MTHFSA0A0A6YYL1 179 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 CAND2O75155 1236 aa7.61□□□□□ -1.19
CCDC39-207ENST00000495817 SRSF2Q01130 221 aaKnown RBP7.61□□□□□ -1.19
CCDC39-207ENST00000495817 ADCY2Q08462 1091 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms