RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 FAM13AO94988 1023 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 STAG3L1P0CL83 205 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 CMA1P23946 247 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 EFNA5P52803 228 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 AMPD3Q01432 767 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 TMEM132AQ24JP5 1023 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 TWF2Q6IBS0 349 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 FAM117BQ6P1L5 589 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 SLC24A5Q71RS6 500 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 IFNLR1Q8IU57 520 aaPredicted RBP13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 CEP57L1Q8IYX8 460 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 TOP1MTQ969P6 601 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 TMX1Q9H3N1 280 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 ZHX3Q9H4I2 956 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 GDPD2Q9HCC8 539 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 KMT5AQ9NQR1 393 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 LARSQ9P2J5 1176 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 KCNH3Q9ULD8 1083 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 PCDHB7Q9Y5E2 793 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 PHLPP2Q6ZVD8 1323 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 MYH11P35749 1972 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 A0A087X0B3 334 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 NPHP3-ACAD11A0A0J9YXS1 232 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 RBAK-RBAKDNI3L0D1 243 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 GJB5O95377 273 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 PLS3P13797 630 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 LIG1P18858 919 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 AXLP30530 894 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 NPTX2P47972 431 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 SARSP49591 514 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 RABGGTBP53611 331 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 CACNB1Q02641 598 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 MBTD1Q05BQ5 628 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 MAPK6Q16659 721 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 NAALADL2Q58DX5 795 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 ARSHQ5FYA8 562 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 CDCA2Q69YH5 1023 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 FAM109BQ6ICB4 259 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 DYMQ7RTS9 669 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 LRRC15Q8TF66 581 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 BSNDQ8WZ55 320 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 YME1L1Q96TA2 773 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 RAD9AQ99638 391 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 REEP2Q9BRK0 252 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 MINDY3Q9H8M7 445 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 MAGEF1Q9HAY2 307 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 PARVGQ9HBI0 331 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 AGPAT5Q9NUQ2 364 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 PRMT7Q9NVM4 692 aaPredicted RBP13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 INSL6Q9Y581 213 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 PCDHA11Q9Y5I1 949 aa13.34□□□□□ -0.27
CSNK1E-213ENST00000495232 A0A1B0GVL5 298 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 H0YCG3 227 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 K7ERI5 159 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 MGEA5O60502 916 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 SKIP12755 728 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 DNAJB2P25686 324 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 GIT2Q14161 759 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 NOTUMQ6P988 496 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 TMCO2Q7Z6W1 182 aaPredicted RBP13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 RTN4RL1Q86UN2 441 aaPredicted RBP13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 NPAS4Q8IUM7 802 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 MYCT1Q8N699 235 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 LINC01599Q8WXQ3 324 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 DDX12PQ92771 950 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 TIFAQ96CG3 184 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 PRIMPOLQ96LW4 560 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 PBX4Q9BYU1 374 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 TRIM6Q9C030 488 aaPredicted RBP13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 TNMDQ9H2S6 317 aa13.33□□□□□ -0.28
CSNK1E-213ENST00000495232 A0A1W2PQ27 194 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 A0A1W2PQ64 194 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 A0A1W2PQD8 194 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 SOX1O00570 391 aaPredicted RBP13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 TSPAN1O60635 241 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 PRKCBP05771 671 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 PFKFB1P16118 471 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 PBX2P40425 430 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 SYKP43405 635 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 STRN3Q13033 797 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 MAPK7Q13164 816 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 PRPF4BQ13523 1007 aaKnown RBP13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 DSC3Q14574 896 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 DAW1Q8N136 415 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 FSIP1Q8NA03 581 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 RNF169Q8NCN4 708 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 SPIRE2Q8WWL2 714 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 MRPS27Q92552 414 aaKnown RBP13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 CCDC51Q96ER9 411 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 CCDC34Q96HJ3 373 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 LRCH3Q96II8 777 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 KIFC3Q9BVG8 833 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 SLC28A3Q9HAS3 691 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 USP25Q9UHP3 1055 aa13.32□□□□□ -0.28
CSNK1E-213ENST00000495232 PTPRSQ13332 1948 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 A0A0U1RQF3 1178 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 MYMKA6NI61 221 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 C9IYK1 514 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 ACKR2O00590 384 aa13.31□□□□□ -0.28
CSNK1E-213ENST00000495232 SLC16A4O15374 487 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms