RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 KXD1Q9BQD3 176 aa16.69■□□□□ 0.26
CHMP2B-205ENST00000494980 PKD2L1Q9P0L9 805 aa16.69■□□□□ 0.26
CHMP2B-205ENST00000494980 DPP7Q9UHL4 492 aa16.69■□□□□ 0.26
CHMP2B-205ENST00000494980 NDRG2Q9UN36 371 aaKnown RBP16.69■□□□□ 0.26
CHMP2B-205ENST00000494980 ZFP37Q9Y6Q3 630 aaPredicted RBP16.69■□□□□ 0.26
CHMP2B-205ENST00000494980 CACNA1EQ15878 2313 aa16.69■□□□□ 0.26
CHMP2B-205ENST00000494980 HMMRO75330 724 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 GALTP07902 379 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 PARP1P09874 1014 aaKnown RBP16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 SPATA31D3P0C874 917 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 KLRC1P26715 233 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 CRYBB1P53674 252 aaPredicted RBP16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 SATB1Q01826 763 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 COL28A1Q2UY09 1125 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 ZMYM1Q5SVZ6 1142 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 RNF43Q68DV7 783 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 SPATA31D4Q6ZUB0 917 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 MTSS1LQ765P7 747 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 ZNF598Q86UK7 904 aaKnown RBP16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 NLRX1Q86UT6 975 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 TNPO1Q92973 898 aaKnown RBP16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 SMOC1Q9H4F8 434 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 AZI2Q9H6S1 392 aa16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 MRPL17Q9NRX2 175 aaKnown RBP16.68■□□□□ 0.26
CHMP2B-205ENST00000494980 SMARCA5O60264 1052 aaPredicted RBP16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 ADH1AP07327 375 aa16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 ZSCAN20P17040 1043 aaPredicted RBP16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 FSHRP23945 695 aa16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 CNR2P34972 360 aa16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 KIAA1211LQ6NV74 962 aa16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 MAMSTRQ6ZN01 415 aa16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 SIRT2Q8IXJ6 389 aa16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 NT5C3AQ9H0P0 336 aa16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 NRDE2Q9H7Z3 1164 aa16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 HEBP1Q9NRV9 189 aa16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 CDH7Q9ULB5 785 aa16.67■□□□□ 0.26
CHMP2B-205ENST00000494980 CARNS1A5YM72 827 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 SHISA7A6NL88 538 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 ZBTB5O15062 677 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 TEX28O15482 410 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 SLC11A1P49279 550 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 AK2P54819 239 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 SH3PXD2AQ5TCZ1 1133 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 PCNX4Q63HM2 1172 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 HEATR6Q6AI08 1181 aaKnown RBP16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 ZNF687Q8N1G0 1237 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 IER2Q9BTL4 223 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 GBP3Q9H0R5 595 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 KAT14Q9H8E8 782 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 CACNA2D2Q9NY47 1150 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 DNAJB4Q9UDY4 337 aa16.66■□□□□ 0.26
CHMP2B-205ENST00000494980 PAPLNO95428 1278 aa16.65■□□□□ 0.26
CHMP2B-205ENST00000494980 LONP2Q86WA8 852 aa16.65■□□□□ 0.26
CHMP2B-205ENST00000494980 PROSER1Q86XN7 944 aa16.65■□□□□ 0.26
CHMP2B-205ENST00000494980 GLIS3Q8NEA6 775 aa16.65■□□□□ 0.26
CHMP2B-205ENST00000494980 MTMR8Q96EF0 704 aa16.65■□□□□ 0.26
CHMP2B-205ENST00000494980 PHF20Q9BVI0 1012 aa16.65■□□□□ 0.26
CHMP2B-205ENST00000494980 PRKD2Q9BZL6 878 aa16.65■□□□□ 0.26
CHMP2B-205ENST00000494980 TBC1D13Q9NVG8 400 aa16.65■□□□□ 0.26
CHMP2B-205ENST00000494980 NEUROG3Q9Y4Z2 214 aa16.65■□□□□ 0.26
CHMP2B-205ENST00000494980 A0A0U1RQF3 1178 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 B4GALT3O60512 393 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 VTNP04004 478 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 URODP06132 367 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 CXCL12P48061 93 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 HAND2P61296 217 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 RNASELQ05823 741 aaKnown RBP16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 DGKHQ86XP1 1220 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 HOMER1Q86YM7 354 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 MIER1Q8N108 512 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 STAG2Q8N3U4 1231 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 GPRASP2Q96D09 838 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 RPS6KC1Q96S38 1066 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 WDR81Q562E7 1941 aa16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 ASCC3Q8N3C0 2202 aaKnown RBP16.64■□□□□ 0.25
CHMP2B-205ENST00000494980 HYAL3O43820 417 aaPredicted RBP16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 GPR32O75388 356 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 EPN2O95208 641 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 TCEAL6Q6IPX3 200 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 FGF13Q92913 245 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 TCEAL3Q969E4 200 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 CDHR1Q96JP9 859 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 LRRCC1Q9C099 1032 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 ADAMTS10Q9H324 1103 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 ZDHHC7Q9NXF8 308 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 STK39Q9UEW8 545 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 KLK13Q9UKR3 277 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 INPP5FQ9Y2H2 1132 aa16.63■□□□□ 0.25
CHMP2B-205ENST00000494980 NTHL1P78549 312 aa16.62■□□□□ 0.25
CHMP2B-205ENST00000494980 ALX1Q15699 326 aa16.62■□□□□ 0.25
CHMP2B-205ENST00000494980 LONRF3Q496Y0 759 aa16.62■□□□□ 0.25
CHMP2B-205ENST00000494980 PLPPR4Q7Z2D5 763 aa16.62■□□□□ 0.25
CHMP2B-205ENST00000494980 GRASPQ7Z6J2 395 aaPredicted RBP16.62■□□□□ 0.25
CHMP2B-205ENST00000494980 LPPQ93052 612 aa16.62■□□□□ 0.25
CHMP2B-205ENST00000494980 GPATCH3Q96I76 525 aa16.62■□□□□ 0.25
CHMP2B-205ENST00000494980 EDEM2Q9BV94 578 aa16.62■□□□□ 0.25
CHMP2B-205ENST00000494980 JPH1Q9HDC5 661 aaPredicted RBP16.62■□□□□ 0.25
CHMP2B-205ENST00000494980 MSRB2Q9Y3D2 182 aa16.62■□□□□ 0.25
CHMP2B-205ENST00000494980 PTPN13Q12923 2485 aa16.62■□□□□ 0.25
CHMP2B-205ENST00000494980 COL4A2P08572 1712 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms