RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 TBX10O75333 385 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 LYPLA2O95372 231 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 NRIP1P48552 1158 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 AFF1P51825 1210 aaKnown RBP11.83□□□□□ -0.52
NELFE-213ENST00000494956 CAPSQ13938 189 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 COL19A1Q14993 1142 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 ECM1Q16610 540 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
NELFE-213ENST00000494956 POTEGQ6S5H5 508 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 KCNT2Q6UVM3 1135 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 ABI1Q8IZP0 508 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 C4orf32Q8N8J7 132 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 MICAL1Q8TDZ2 1067 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 JPH2Q9BR39 696 aaPredicted RBP11.83□□□□□ -0.52
NELFE-213ENST00000494956 FAM105AQ9NUU6 356 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 INPP5FQ9Y2H2 1132 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 PCDHB12Q9Y5F1 795 aa11.83□□□□□ -0.52
NELFE-213ENST00000494956 PP2D1A8MPX8 630 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 ST18O60284 1047 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 LAG3P18627 525 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 GLRA2P23416 452 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 GJB2P29033 226 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 HOXA11P31270 313 aaPredicted RBP11.82□□□□□ -0.52
NELFE-213ENST00000494956 CDC42EP1Q00587 391 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 CTC1Q2NKJ3 1217 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 NAALADL2Q58DX5 795 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 UBXN11Q5T124 520 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 PLPP4Q5VZY2 271 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 MCTP1Q6DN14 999 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 AGMOQ6ZNB7 445 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 TMEM173Q86WV6 379 aaPredicted RBP11.82□□□□□ -0.52
NELFE-213ENST00000494956 CDR2LQ86X02 465 aaPredicted RBP11.82□□□□□ -0.52
NELFE-213ENST00000494956 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
NELFE-213ENST00000494956 LRRC43Q8N309 656 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 TCP11Q8WWU5 503 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 TBC1D32Q96NH3 1257 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 EIF2AQ9BY44 585 aaKnown RBP11.82□□□□□ -0.52
NELFE-213ENST00000494956 INO80BQ9C086 356 aaPredicted RBP11.82□□□□□ -0.52
NELFE-213ENST00000494956 POLR3FQ9H1D9 316 aaPredicted RBP11.82□□□□□ -0.52
NELFE-213ENST00000494956 CHST12Q9NRB3 414 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 AAASQ9NRG9 546 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 ANKEF1Q9NU02 776 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 AGPAT5Q9NUQ2 364 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 DACT1Q9NYF0 836 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 USP20Q9Y2K6 914 aa11.82□□□□□ -0.52
NELFE-213ENST00000494956 GRXCR2A6NFK2 248 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 B4GALT5O43286 388 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 HOXA2O43364 376 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 OFD1O75665 1012 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 GLP2RO95838 553 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 EOMESO95936 686 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 U2AF2P26368 475 aaKnown RBP eCLIP11.81□□□□□ -0.52
NELFE-213ENST00000494956 CDC25AP30304 524 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 ARL2P36404 184 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 PTENP60484 403 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 PTGDRQ13258 359 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 ADAM15Q13444 863 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 IL17AQ16552 155 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 SRGAP1Q7Z6B7 1085 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 VN1R2Q8NFZ6 395 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 BCL7CQ8WUZ0 217 aaPredicted RBP11.81□□□□□ -0.52
NELFE-213ENST00000494956 BSNDQ8WZ55 320 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 CCDC43Q96MW1 224 aaKnown RBP11.81□□□□□ -0.52
NELFE-213ENST00000494956 ZNF558Q96NG5 402 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 GBP3Q9H0R5 595 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 EPHX3Q9H6B9 360 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 NRDE2Q9H7Z3 1164 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 TLR9Q9NR96 1032 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 DNAJB4Q9UDY4 337 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 BARX2Q9UMQ3 279 aaPredicted RBP11.81□□□□□ -0.52
NELFE-213ENST00000494956 HES2Q9Y543 173 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 PPME1Q9Y570 386 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 PCDHB2Q9Y5E7 798 aa11.81□□□□□ -0.52
NELFE-213ENST00000494956 TTLL13PA6NNM8 815 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 HIDE1A8MVS5 230 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 INO80B-WBP1J3KQ70 363 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 FSCN2O14926 492 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 TSPAN1O60635 241 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 ZC3H11AO75152 810 aaKnown RBP eCLIP11.8□□□□□ -0.52
NELFE-213ENST00000494956 DGAT1O75907 488 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 CCT6AP40227 531 aaKnown RBP11.8□□□□□ -0.52
NELFE-213ENST00000494956 BCAR1P56945 870 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 MBTD1Q05BQ5 628 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 AMHR2Q16671 573 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 ZNF280BQ86YH2 543 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 FAM178BQ8IXR5 827 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 EXOC8Q8IYI6 725 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 SLC39A11Q8N1S5 342 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 SMG8Q8ND04 991 aaKnown RBP11.8□□□□□ -0.52
NELFE-213ENST00000494956 MRPS27Q92552 414 aaKnown RBP11.8□□□□□ -0.52
NELFE-213ENST00000494956 POLR3CQ9BUI4 534 aaPredicted RBP11.8□□□□□ -0.52
NELFE-213ENST00000494956 TRAIPQ9BWF2 469 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 TLE6Q9H808 572 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 TUFT1Q9NNX1 390 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 TBC1D13Q9NVG8 400 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 CLEC1BQ9P126 229 aa11.8□□□□□ -0.52
NELFE-213ENST00000494956 NOL7Q9UMY1 257 aaKnown RBP11.8□□□□□ -0.52
NELFE-213ENST00000494956 TDRD15B5MCY1 1934 aaKnown RBP11.8□□□□□ -0.52
NELFE-213ENST00000494956 LRRIQ4A6NIV6 560 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms