RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 TAF4O00268 1085 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 TM4SF5O14894 197 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 FOXD2O60548 495 aaPredicted RBP7.78□□□□□ -1.16
FN1-225ENST00000494446 KCNK5O95279 499 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 GALTP07902 379 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 SPINK2P20155 84 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 AK2P54819 239 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 RNASELQ05823 741 aaKnown RBP7.78□□□□□ -1.16
FN1-225ENST00000494446 FOXC1Q12948 553 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 MTMR1Q13613 665 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 SF3A2Q15428 464 aaKnown RBP7.78□□□□□ -1.16
FN1-225ENST00000494446 LONRF3Q496Y0 759 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 USP17L6PQ6QN14 398 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 PARM1Q6UWI2 310 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 RSPO2Q6UXX9 243 aaPredicted RBP7.78□□□□□ -1.16
FN1-225ENST00000494446 TPRG1Q6ZUI0 275 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 PIBF1Q8WXW3 757 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 MAP4K1Q92918 833 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 CUL5Q93034 780 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 CLDN23Q96B33 292 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 NELL2Q99435 816 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 NRDE2Q9H7Z3 1164 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 JPH1Q9HDC5 661 aaPredicted RBP7.78□□□□□ -1.16
FN1-225ENST00000494446 MRPL17Q9NRX2 175 aaKnown RBP7.78□□□□□ -1.16
FN1-225ENST00000494446 SLC9A2Q9UBY0 812 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 DNAJB4Q9UDY4 337 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 MAD2L2Q9UI95 211 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 NOTCH4Q99466 2003 aa7.78□□□□□ -1.16
FN1-225ENST00000494446 PNMA6FA0A0J9YX94 578 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 TMEM8BA6NDV4 472 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 B4E1Z4 1266 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 GPR32O75388 356 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 GLUD1P00367 558 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 ADH1AP07327 375 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 ITGB5P18084 799 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 RPS9P46781 194 aaKnown RBP7.77□□□□□ -1.17
FN1-225ENST00000494446 SLC11A1P49279 550 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 RBM25P49756 843 aaKnown RBP7.77□□□□□ -1.17
FN1-225ENST00000494446 LIMK1P53667 647 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 PFKPQ01813 784 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 SRSF5Q13243 272 aaKnown RBP7.77□□□□□ -1.17
FN1-225ENST00000494446 PPP2R5DQ14738 602 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 CCDC6Q16204 474 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 STPG1Q5TH74 334 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 PSAPL1Q6NUJ1 521 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 PLPPR4Q7Z2D5 763 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 ZNF598Q86UK7 904 aaKnown RBP7.77□□□□□ -1.17
FN1-225ENST00000494446 METTL13Q8N6R0 699 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 C12orf50Q8NA57 414 aaPredicted RBP7.77□□□□□ -1.17
FN1-225ENST00000494446 PI4K2BQ8TCG2 481 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 ZCCHC14Q8WYQ9 949 aaKnown RBP7.77□□□□□ -1.17
FN1-225ENST00000494446 ZNF707Q96C28 371 aaPredicted RBP7.77□□□□□ -1.17
FN1-225ENST00000494446 KIF12Q96FN5 646 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 RHOBTB2Q9BYZ6 727 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 HELLSQ9NRZ9 838 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 DPP7Q9UHL4 492 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 DDX19BQ9UMR2 479 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 INPP5FQ9Y2H2 1132 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 EML5Q05BV3 1969 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 SHROOM3Q8TF72 1996 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 TTC41PQ6P2S7 1318 aa7.77□□□□□ -1.17
FN1-225ENST00000494446 COL1A2P08123 1366 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 ATG2BQ96BY7 2078 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 A0A0U1RQF3 1178 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 CARNS1A5YM72 827 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 CHURC1-FNTBB4DL54 471 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 ZNF213O14771 459 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 HRO43593 1189 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 HBP1O60381 514 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 LILRB3O75022 631 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 URODP06132 367 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 MS4A1P11836 297 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 TDGF1P13385 188 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 FGFR4P22455 802 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 FSHRP23945 695 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 FNTBP49356 437 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 NLRP11P59045 1033 aaKnown RBP7.76□□□□□ -1.17
FN1-225ENST00000494446 ACTR2P61160 394 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 MMRN1Q13201 1228 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 FZD5Q13467 585 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 SLC35G1Q2M3R5 365 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 MCMDC2Q4G0Z9 681 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 NOMO2Q5JPE7 1267 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 ZNF484Q5JVG2 852 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 IFIT1BQ5T764 474 aaKnown RBP7.76□□□□□ -1.17
FN1-225ENST00000494446 ZNF852Q6ZMS4 543 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 MTSS1LQ765P7 747 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 PALB2Q86YC2 1186 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 LPPQ93052 612 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 ZNF668Q96K58 619 aaPredicted RBP7.76□□□□□ -1.17
FN1-225ENST00000494446 FAM227BQ96M60 508 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 KXD1Q9BQD3 176 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 SDF4Q9BRK5 362 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 ADAM33Q9BZ11 813 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 NT5C3AQ9H0P0 336 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 RIOX1Q9H6W3 641 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 RXFP3Q9NSD7 469 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 TBC1D13Q9NVG8 400 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 ZSWIM5Q9P217 1185 aa7.76□□□□□ -1.17
FN1-225ENST00000494446 NDRG2Q9UN36 371 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms