RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 AGMOQ6ZNB7 445 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 MAEAQ7L5Y9 396 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 CATSPER4Q7RTX7 472 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 ZNF710Q8N1W2 664 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 RNF149Q8NC42 400 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 PSPC1Q8WXF1 523 aaKnown RBP14.06□□□□□ -0.16
HSPG2-212ENST00000493940 PABPC5Q96DU9 382 aaKnown RBP14.06□□□□□ -0.16
HSPG2-212ENST00000493940 MTRQ99707 1265 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 TRAIPQ9BWF2 469 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 LMAN2LQ9H0V9 348 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 ANKEF1Q9NU02 776 aa14.06□□□□□ -0.16
HSPG2-212ENST00000493940 PIN4Q9Y237 131 aaKnown RBP14.06□□□□□ -0.16
HSPG2-212ENST00000493940 TTLL13PA6NNM8 815 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 PP2D1A8MPX8 630 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 PER2O15055 1255 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 OFD1O75665 1012 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 GLP2RO95838 553 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 EOMESO95936 686 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 OR52Z1P0C646 297 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 GJB2P29033 226 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 CDC25AP30304 524 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 PTENP60484 403 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 CDC42EP1Q00587 391 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 ADAM15Q13444 863 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 TMEM31Q5JXX7 168 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 TWF2Q6IBS0 349 aaKnown RBP14.05□□□□□ -0.16
HSPG2-212ENST00000493940 KCNT2Q6UVM3 1135 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 SRGAP1Q7Z6B7 1085 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 RBM23Q86U06 439 aaKnown RBP14.05□□□□□ -0.16
HSPG2-212ENST00000493940 TMEM173Q86WV6 379 aaPredicted RBP14.05□□□□□ -0.16
HSPG2-212ENST00000493940 VN1R2Q8NFZ6 395 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 BCL7CQ8WUZ0 217 aaPredicted RBP14.05□□□□□ -0.16
HSPG2-212ENST00000493940 BSNDQ8WZ55 320 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 CPB2Q96IY4 423 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 POLR3CQ9BUI4 534 aaPredicted RBP14.05□□□□□ -0.16
HSPG2-212ENST00000493940 EIF2AQ9BY44 585 aaKnown RBP14.05□□□□□ -0.16
HSPG2-212ENST00000493940 RNF39Q9H2S5 420 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 CHST12Q9NRB3 414 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 AGPAT5Q9NUQ2 364 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 FAM105AQ9NUU6 356 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 CLDND1Q9NY35 253 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 USP20Q9Y2K6 914 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 DOCK6Q96HP0 2047 aa14.05□□□□□ -0.16
HSPG2-212ENST00000493940 GRXCR2A6NFK2 248 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 FSCN2O14926 492 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 B4GALT5O43286 388 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 TSPAN1O60635 241 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 USO1O60763 962 aaKnown RBP14.04□□□□□ -0.16
HSPG2-212ENST00000493940 GPR37L1O60883 481 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 ZNF623O75123 536 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 EDN1P05305 212 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 SFPQP23246 707 aaKnown RBP eCLIP14.04□□□□□ -0.16
HSPG2-212ENST00000493940 RPA1P27694 616 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 PTGDRQ13258 359 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 CLUL1Q15846 466 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 FAM43BQ6ZT52 329 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-212ENST00000493940 EP400NLQ6ZTU2 488 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 MRPL10Q7Z7H8 261 aaKnown RBP14.04□□□□□ -0.16
HSPG2-212ENST00000493940 CDR2LQ86X02 465 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-212ENST00000493940 ZNF280BQ86YH2 543 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 SMG8Q8ND04 991 aaKnown RBP14.04□□□□□ -0.16
HSPG2-212ENST00000493940 TCP11Q8WWU5 503 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 JPH2Q9BR39 696 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-212ENST00000493940 NRDE2Q9H7Z3 1164 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 TUFT1Q9NNX1 390 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.04□□□□□ -0.16
HSPG2-212ENST00000493940 MIOSQ9NXC5 875 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 DACT1Q9NYF0 836 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 CLEC1BQ9P126 229 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 DNAJB4Q9UDY4 337 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 HCN4Q9Y3Q4 1203 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 PPME1Q9Y570 386 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 PCDHB2Q9Y5E7 798 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 PCDHB12Q9Y5F1 795 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 PLXNA3P51805 1871 aa14.04□□□□□ -0.16
HSPG2-212ENST00000493940 HIDE1A8MVS5 230 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 ASAP2O43150 1006 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 ST18O60284 1047 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 DGAT1O75907 488 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 DDHD2O94830 711 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.16
HSPG2-212ENST00000493940 NRIP1P48552 1158 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 FXR2P51116 673 aaKnown RBP eCLIP14.03□□□□□ -0.16
HSPG2-212ENST00000493940 MBTD1Q05BQ5 628 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 PTCRAQ6ISU1 281 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-212ENST00000493940 IFNLR1Q8IU57 520 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-212ENST00000493940 THNSL1Q8IYQ7 743 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 SLC39A11Q8N1S5 342 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 MMTAG2Q9BU76 263 aaKnown RBP14.03□□□□□ -0.16
HSPG2-212ENST00000493940 INO80BQ9C086 356 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-212ENST00000493940 POLR3FQ9H1D9 316 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-212ENST00000493940 TBC1D13Q9NVG8 400 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 DBR1Q9UK59 544 aaKnown RBP14.03□□□□□ -0.16
HSPG2-212ENST00000493940 HES2Q9Y543 173 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 MTCL1Q9Y4B5 1905 aaKnown RBP14.03□□□□□ -0.16
HSPG2-212ENST00000493940 C2orf16Q68DN1 1984 aa14.03□□□□□ -0.16
HSPG2-212ENST00000493940 GAS2O43903 313 aaKnown RBP14.02□□□□□ -0.17
HSPG2-212ENST00000493940 LAG3P18627 525 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 TRAPPC10P48553 1259 aa14.02□□□□□ -0.17
HSPG2-212ENST00000493940 BCAR1P56945 870 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms