RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 MTERF3Q96E29 417 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 BRD8Q9H0E9 1235 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 RPAP3Q9H6T3 665 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 EMILIN3Q9NT22 766 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 MAN1B1Q9UKM7 699 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 MTRF1O75570 445 aaKnown RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 SRP72O76094 671 aaKnown RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 LRRC74AQ0VAA2 488 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 TBC1D10BQ4KMP7 808 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 FBXO31Q5XUX0 539 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 SH3BP5LQ7L8J4 393 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 DIS3LQ8TF46 1054 aaKnown RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 DEPDC7Q96QD5 511 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 YIPF2Q9BWQ6 316 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 CNGB3Q9NQW8 809 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 FBXL5Q9UKA1 691 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 POLIQ9UNA4 740 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 NDUFB9Q9Y6M9 179 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 NPM3O75607 178 aaKnown RBP8.34□□□□□ -1.07
BRCA1-221ENST00000493795 TSPY1Q01534 308 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 IDI1Q13907 227 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 MTERF2Q49AM1 385 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 ZNF667Q5HYK9 610 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 RABGAP1LQ5R372 815 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 C16orf89Q6UX73 402 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 KIRREL3Q8IZU9 778 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 FAM162AQ96A26 154 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 DYRK4Q9NR20 520 aa8.34□□□□□ -1.07
BRCA1-221ENST00000493795 FMNL1O95466 1100 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-221ENST00000493795 RAD51Q06609 339 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 SLC39A14Q15043 492 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 HEATR6Q6AI08 1181 aaKnown RBP8.33□□□□□ -1.08
BRCA1-221ENST00000493795 RCSD1Q6JBY9 416 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 SLC30A9Q6PML9 568 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 TNIP2Q8NFZ5 429 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 PPP1R14AQ96A00 147 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 CMTM5Q96DZ9 223 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 TRIM62Q9BVG3 475 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 TSR3Q9UJK0 312 aaKnown RBP8.33□□□□□ -1.08
BRCA1-221ENST00000493795 LRRIQ3A6PVS8 624 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-221ENST00000493795 UBXN2AP68543 259 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 ROR1Q01973 937 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 DNAL1Q4LDG9 190 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 SLC44A4Q53GD3 710 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 RFX8Q6ZV50 586 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 VSTM4Q8IW00 320 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 ANKRD49Q8WVL7 239 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 DCUN1D1Q96GG9 259 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 VPS50Q96JG6 964 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 PSD3Q9NYI0 1048 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 ADAM22Q9P0K1 906 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 ANAPC7Q9UJX3 599 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 HEY1Q9Y5J3 304 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 TIAM1Q13009 1591 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 SMARCA4P51532 1647 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 LRRC53A6NM62 1247 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 CCNE1P24864 410 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 ADD1P35611 737 aaKnown RBP8.33□□□□□ -1.08
BRCA1-221ENST00000493795 NCALDP61601 193 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 TNFAIP2Q03169 654 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 GTF2H3Q13889 308 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 SYTL3Q4VX76 610 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 CCDC149Q6ZUS6 474 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 RNF135Q8IUD6 432 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 RTL3Q8N8U3 475 aaKnown RBP8.33□□□□□ -1.08
BRCA1-221ENST00000493795 ATP11CQ8NB49 1132 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 EEF2KMTQ96G04 330 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 UNC45AQ9H3U1 944 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 UVRAGQ9P2Y5 699 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 NRBP1Q9UHY1 535 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 BRAFP15056 766 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 ARL4DP49703 201 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 HPCAP84074 193 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 CC2D2BQ6DHV5 1058 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 ALKBH5Q6P6C2 394 aaKnown RBP8.33□□□□□ -1.08
BRCA1-221ENST00000493795 G2E3Q7L622 706 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 KRT78Q8N1N4 520 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 DDI1Q8WTU0 396 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 COQ7Q99807 217 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 C19orf44Q9H6X5 657 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 KLC4Q9NSK0 619 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 ARAP1Q96P48 1450 aa8.33□□□□□ -1.08
BRCA1-221ENST00000493795 FKBP9O95302 570 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 PNMA6AP0CW24 399 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 TYK2P29597 1187 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 LRRC63Q05C16 580 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 DAB2IPQ5VWQ8 1189 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 FKBP9P1Q75LS8 142 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 SMYD4Q8IYR2 804 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 NUP93Q8N1F7 819 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 TMEM35BQ8NCS4 154 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 ZNF507Q8TCN5 953 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 CCDC17Q96LX7 622 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 FOPNLQ96NB1 174 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 MRPL1Q9BYD6 325 aaKnown RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 USP44Q9H0E7 712 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 ZSWIM6Q9HCJ5 1215 aa8.32□□□□□ -1.08
BRCA1-221ENST00000493795 DDX56Q9NY93 547 aaKnown RBP8.32□□□□□ -1.08
BRCA1-221ENST00000493795 BFARQ9NZS9 450 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms