RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 PYGLP06737 847 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 GNAT1P11488 350 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 NOP14P78316 857 aaKnown RBP21.4■■□□□ 1.02
RNF40-203ENST00000493683 STXBP2Q15833 593 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 FRMD5Q7Z6J6 570 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 TBC1D10CQ8IV04 446 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 TMEM47Q9BQJ4 181 aa21.4■■□□□ 1.02
RNF40-203ENST00000493683 WARS2Q9UGM6 360 aaKnown RBP21.4■■□□□ 1.02
RNF40-203ENST00000493683 AARSP49588 968 aaKnown RBP eCLIP21.39■■□□□ 1.02
RNF40-203ENST00000493683 CATSPER4Q7RTX7 472 aa21.39■■□□□ 1.02
RNF40-203ENST00000493683 NLRP4Q96MN2 994 aa21.39■■□□□ 1.02
RNF40-203ENST00000493683 VPS11Q9H270 941 aa21.39■■□□□ 1.02
RNF40-203ENST00000493683 OLA1Q9NTK5 396 aaKnown RBP21.39■■□□□ 1.02
RNF40-203ENST00000493683 GTSE1Q9NYZ3 720 aa21.39■■□□□ 1.02
RNF40-203ENST00000493683 CDHR2Q9BYE9 1310 aa21.39■■□□□ 1.02
RNF40-203ENST00000493683 GPC3P51654 580 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 C16orf87Q6PH81 154 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 RTKN2Q8IZC4 609 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 BEST2Q8NFU1 509 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 SNX19Q92543 992 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 ASPSCR1Q9BZE9 553 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 AP3B1O00203 1094 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 P4HBP07237 508 aaKnown RBP21.39■■□□□ 1.01
RNF40-203ENST00000493683 TMEM270Q6UE05 265 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 ICA1LQ8NDH6 482 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 WWP1Q9H0M0 922 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 ECT2Q9H8V3 914 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 BFARQ9NZS9 450 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 KIAA0391O15091 583 aaKnown RBP21.39■■□□□ 1.01
RNF40-203ENST00000493683 KRT14P02533 472 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 ELF1P32519 619 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 GCLMP48507 274 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 HEATR6Q6AI08 1181 aaKnown RBP21.39■■□□□ 1.01
RNF40-203ENST00000493683 CEP70Q8NHQ1 597 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 NEDD4P46934 1319 aa21.39■■□□□ 1.01
RNF40-203ENST00000493683 IFT43Q96FT9 208 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 LY9Q9HBG7 655 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 ROR1Q01973 937 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 DRAP1Q14919 205 aaPredicted RBP21.38■■□□□ 1.01
RNF40-203ENST00000493683 RARS2Q5T160 578 aaKnown RBP21.38■■□□□ 1.01
RNF40-203ENST00000493683 LRIG3Q6UXM1 1119 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 RGS9BPQ6ZS82 235 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 HEMGNQ9BXL5 484 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 BARHL2Q9NY43 387 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 HSPA9P38646 679 aaKnown RBP21.38■■□□□ 1.01
RNF40-203ENST00000493683 RCSD1Q6JBY9 416 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 NFRKBQ6P4R8 1299 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 NUDCD3Q8IVD9 361 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 CDC26Q8NHZ8 85 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 POTEMA6NI47 508 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 H0Y3Z8 333 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 HUS1O60921 280 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 TSGA10IPQ3SY00 556 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 DHX40Q8IX18 779 aaKnown RBP21.38■■□□□ 1.01
RNF40-203ENST00000493683 HIPK4Q8NE63 616 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 C11orf70Q9BRQ4 267 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 ETNK1Q9HBU6 452 aa21.38■■□□□ 1.01
RNF40-203ENST00000493683 CCDC137Q6PK04 289 aaKnown RBP21.37■■□□□ 1.01
RNF40-203ENST00000493683 KIF2CQ99661 725 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 MRGBPQ9NV56 204 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 CHCHD3Q9NX63 227 aaKnown RBP21.37■■□□□ 1.01
RNF40-203ENST00000493683 RNF103-CHMP3A0A140T963 221 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 AGTP01019 485 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 FDX1P10109 184 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 EXT2Q93063 718 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 METP08581 1390 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 TTC26A0AVF1 554 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 DDX5P17844 614 aaKnown RBP21.37■■□□□ 1.01
RNF40-203ENST00000493683 KRT4P19013 534 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 BYSLQ13895 437 aaKnown RBP21.37■■□□□ 1.01
RNF40-203ENST00000493683 THNSL1Q8IYQ7 743 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 PIGOQ8TEQ8 1089 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 TIPINQ9BVW5 301 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 SMG5Q9UPR3 1016 aaKnown RBP21.37■■□□□ 1.01
RNF40-203ENST00000493683 SLC16A3O15427 465 aaKnown RBP21.37■■□□□ 1.01
RNF40-203ENST00000493683 ANP32DO95626 131 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 USP11P51784 963 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 SGMS1Q86VZ5 419 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 PPM1NQ8N819 430 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 FTLP02792 175 aaPredicted RBP21.37■■□□□ 1.01
RNF40-203ENST00000493683 HPCAL4Q9UM19 191 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 UTYO14607 1347 aa21.37■■□□□ 1.01
RNF40-203ENST00000493683 PDIA2Q13087 525 aaKnown RBP21.36■■□□□ 1.01
RNF40-203ENST00000493683 PRKAG2Q9UGJ0 569 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 PIK3R2O00459 728 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 TRADDQ15628 312 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 IMPG1Q17R60 797 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 USP17L5A8MUK1 530 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 GNA15P30679 374 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 QARSP47897 775 aaKnown RBP21.36■■□□□ 1.01
RNF40-203ENST00000493683 ATP2C1P98194 919 aaPredicted RBP21.36■■□□□ 1.01
RNF40-203ENST00000493683 GPS1Q13098 491 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 ZBTB41Q5SVQ8 909 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 DYDC2Q96IM9 177 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 SMYD3Q9H7B4 428 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 HOXC10Q9NYD6 342 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 PRAMEF22A3QJZ6 481 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 SFI1A8K8P3 1242 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 GYS2P54840 703 aa21.36■■□□□ 1.01
RNF40-203ENST00000493683 TSPY1Q01534 308 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms