RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 LRIG3Q6UXM1 1119 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 B3GNT6Q6ZMB0 384 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 PPP1R21Q6ZMI0 780 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 COPS6Q7L5N1 327 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 FAM186BQ8IYM0 893 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 AGGF1Q8N302 714 aaeCLIP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 FAM13CQ8NE31 585 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 CASKIN2Q8WXE0 1202 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 MAP4K1Q92918 833 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 VMP1Q96GC9 406 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 MS4A14Q96JA4 679 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 CYTH2Q99418 400 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 UBAC1Q9BSL1 405 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 DHX36Q9H2U1 1008 aaKnown RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 PSTPIP2Q9H939 334 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 KCNK9Q9NPC2 374 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 GPR108Q9NPR9 543 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 TUBE1Q9UJT0 475 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 RTL9Q8NET4 1388 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 BAZ2AQ9UIF9 1905 aaKnown RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 DUOX1Q9NRD9 1551 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 SALL1Q9NSC2 1324 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 TCP11X1B4DZS4 312 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 RASA4BC9J798 803 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 RASA4O43374 803 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 MTRF1O75570 445 aaKnown RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 GLRX3O76003 335 aaKnown RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 OR6B1O95007 311 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 PGM3O95394 542 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 MOCS3O95396 460 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 CYP1A1P04798 512 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 CYP2C9P11712 490 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 ERCC5P28715 1186 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 EPHB2P29323 1055 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 RFC1P35251 1148 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 MXI1P50539 228 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 TNNC1P63316 161 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 RELAQ04206 551 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 AGAP9Q5VTM2 703 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 LRRC74BQ6ZQY2 392 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 ANKRD13CQ8N6S4 541 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 GOLM1Q8NBJ4 401 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 PLBD2Q8NHP8 589 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 RAB3IL1Q8TBN0 382 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 MCUR1Q96AQ8 359 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 TRIM31Q9BZY9 425 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 GLT8D2Q9H1C3 349 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 ASCC2Q9H1I8 757 aaPredicted RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 SNX25Q9H3E2 840 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 FAIMQ9NVQ4 179 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 HAO1Q9UJM8 370 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 MAN1B1Q9UKM7 699 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 KCNH3Q9ULD8 1083 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 CCPG1Q9ULG6 757 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 ZBTB1Q9Y2K1 713 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 ARL2BPQ9Y2Y0 163 aa7.35□□□□□ -1.23
VPS13B-205ENST00000493587 RBBP6Q7Z6E9 1792 aaKnown RBP7.35□□□□□ -1.23
VPS13B-205ENST00000493587 GOLGA8IPA6NC78 632 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 SNX3O60493 162 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 MYCP01106 439 aaPredicted RBP7.34□□□□□ -1.23
VPS13B-205ENST00000493587 UBTFL1P0CB47 393 aaPredicted RBP7.34□□□□□ -1.23
VPS13B-205ENST00000493587 CABP4P57796 275 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 BASP1P80723 227 aaKnown RBP7.34□□□□□ -1.23
VPS13B-205ENST00000493587 KIF23Q02241 960 aaPredicted RBP7.34□□□□□ -1.23
VPS13B-205ENST00000493587 PRR23CQ6ZRP0 262 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 RFX8Q6ZV50 586 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 NOP9Q86U38 636 aaKnown RBP7.34□□□□□ -1.23
VPS13B-205ENST00000493587 SATL1Q86VE3 508 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 CREG2Q8IUH2 290 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 CDK5RAP3Q96JB5 506 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 PBKQ96KB5 322 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 HAUS7Q99871 368 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 ZBED2Q9BTP6 218 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 LACRTQ9GZZ8 138 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 RPAP3Q9H6T3 665 aaPredicted RBP7.34□□□□□ -1.23
VPS13B-205ENST00000493587 ATP8A2Q9NTI2 1148 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 TBCCD1Q9NVR7 557 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 ASAP1Q9ULH1 1129 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 NOX1Q9Y5S8 564 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 TAF6LQ9Y6J9 622 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 COL1A1P02452 1464 aaPredicted RBP7.34□□□□□ -1.23
VPS13B-205ENST00000493587 PCP4L1A6NKN8 68 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 MCF2LO15068 1137 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 STAM2O75886 525 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 KRT32Q14532 448 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 TRADDQ15628 312 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 CTC1Q2NKJ3 1217 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 ANKDD1AQ495B1 522 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 DAB2IPQ5VWQ8 1189 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 DDX42Q86XP3 938 aaKnown RBP eCLIP7.34□□□□□ -1.23
VPS13B-205ENST00000493587 ARHGAP24Q8N264 748 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 FNDC8Q8TC99 324 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 AZIN2Q96A70 460 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 FAM136AQ96C01 138 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 ERP27Q96DN0 273 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 ANKRD36BP1Q96IX9 119 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 FAM227BQ96M60 508 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 ZNF184Q99676 751 aaPredicted RBP7.34□□□□□ -1.23
VPS13B-205ENST00000493587 GBA3Q9H227 469 aa7.34□□□□□ -1.23
VPS13B-205ENST00000493587 TRNAU1APQ9NX07 287 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms