RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CRTAC1Q9NQ79 661 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF277Q9NRM2 450 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 LRRC4BQ9NT99 713 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 TBCCD1Q9NVR7 557 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 DACH1Q9UI36 760 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 HOOK1Q9UJC3 728 aaKnown RBP4.6□□□□□ -1.67
BRCA1-220ENST00000492859 EXOC7Q9UPT5 735 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 POLHQ9Y253 713 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 PCDHGA11Q9Y5H2 935 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 MROH5Q6ZUA9 1318 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 MYO3BQ8WXR4 1341 aa4.6□□□□□ -1.67
BRCA1-220ENST00000492859 CCDC180Q9P1Z9 1646 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 CLRN2A0PK11 232 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 C16orf96A6NNT2 1141 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 MEN1O00255 615 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 VWA5AO00534 786 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 MAPK13O15264 365 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 FMO6PO60774 539 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 PIAS2O75928 621 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 DDAH1O94760 285 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ALDH1A2O94788 518 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 PRKD3O94806 890 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 KCNH1O95259 989 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ZBED1O96006 694 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 MT-CO1P00395 513 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 SNRNP70P08621 437 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 SNRPA1P09661 255 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 LTA4HP09960 611 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 SLFN14P0C7P3 912 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 SRGAP2BP0DMP2 458 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 TROVE2P10155 538 aaKnown RBP eCLIP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ARAFP10398 606 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 VAV1P15498 845 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 VEGFAP15692 232 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 IL11P20809 199 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 SFPQP23246 707 aaKnown RBP eCLIP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 GDI1P31150 447 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 GBP2P32456 591 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 HOXD13P35453 343 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 RECQLP46063 649 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 HNMTP50135 292 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 AP3M2P53677 418 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 EIF6P56537 245 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 B2MP61769 119 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 IFI35P80217 286 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 BASP1P80723 227 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 PRR20EP86478 221 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 PRR20CP86479 221 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 PRR20DP86480 221 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 PRR20BP86481 221 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 PRR20AP86496 221 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 AIMP1Q12904 312 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 TRIM32Q13049 653 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 MTX1Q13505 466 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 BTG3Q14201 252 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 GRIN2CQ14957 1233 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 SART3Q15020 963 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 LLGL1Q15334 1064 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 TAF5Q15542 800 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 LONRF2Q1L5Z9 754 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ALG11Q2TAA5 492 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ODF2Q5BJF6 829 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 HAUS3Q68CZ6 603 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 NAIF1Q69YI7 327 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 C16orf46Q6P387 395 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 NEK5Q6P3R8 708 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 TMEM154Q6P9G4 183 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 OLFM4Q6UX06 510 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 B3GNT6Q6ZMB0 384 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF783Q6ZMS7 281 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 MEX3BQ6ZN04 569 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 KRT73Q86Y46 540 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 RAB11FIP4Q86YS3 637 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 CMTR2Q8IYT2 770 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 PPM1KQ8N3J5 372 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 TMCO5AQ8N6Q1 288 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ZBTB38Q8NAP3 1195 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 SLC4A11Q8NBS3 891 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ARRDC4Q8NCT1 418 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 FAM156AQ8NDB6 213 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 CHST13Q8NET6 341 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ATP2A3Q93084 1043 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ZNF669Q96BR6 464 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 HSPBAP1Q96EW2 488 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 CDCA5Q96FF9 252 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ZSCAN31Q96LW9 406 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 CMTM3Q96MX0 182 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 ACAP3Q96P50 834 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 YME1L1Q96TA2 773 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 TCF25Q9BQ70 676 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 NOC4LQ9BVI4 516 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 SPATA9Q9BWV2 254 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 EMILIN2Q9BXX0 1053 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 UNKQ9C0B0 810 aaKnown RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 MTFR1LQ9H019 292 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 BRD8Q9H0E9 1235 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 OR10A4Q9H209 315 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 CCDC177Q9NQR7 707 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-220ENST00000492859 NDFIP2Q9NV92 336 aa4.59□□□□□ -1.67
BRCA1-220ENST00000492859 USP40Q9NVE5 1235 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms