RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 A0A0C4DFX4 3053 aa11.81□□□□□ -0.52
CDC42SE1-206ENST00000492796 LRRIQ4A6NIV6 560 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 C5orf67F2Z3F1 127 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 INO80B-WBP1J3KQ70 363 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 F13A1P00488 732 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 RB1P06400 928 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 LINC00271P0C7V0 271 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 ZSCAN22P10073 491 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 IBSPP21815 317 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 NAMPTP43490 491 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 NASPP49321 788 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 ZRSR1Q15695 479 aaKnown RBP11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 EPC2Q52LR7 807 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 NOTUMQ6P988 496 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 ZNF598Q86UK7 904 aaKnown RBP11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 ZBTB8OSQ8IWT0 167 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 TMEM192Q8IY95 271 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 PRIMPOLQ96LW4 560 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 DRC1Q96MC2 740 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 PNMA5Q96PV4 448 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 USP28Q96RU2 1077 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 PLVAPQ9BX97 442 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 TMEM117Q9H0C3 514 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 C2orf40Q9H1Z8 148 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 FAM105AQ9NUU6 356 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 PRMT7Q9NVM4 692 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 LMCD1Q9NZU5 365 aa11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 FBXO2Q9UK22 296 aaPredicted RBP11.8□□□□□ -0.52
CDC42SE1-206ENST00000492796 H3BNC9 293 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 TSPAN1O60635 241 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 LPXNO60711 386 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 ZNF623O75123 536 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 FGFR1P11362 822 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 IGFBP4P22692 258 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 GUCY2CP25092 1073 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 HOXA11P31270 313 aaPredicted RBP11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 CTNNB1P35222 781 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 BMPR1AP36894 532 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 TXLNAP40222 546 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 CEBPZQ03701 1054 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 GRIN1Q05586 938 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 BECN1Q14457 450 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 SLC39A14Q15043 492 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 FAM187BQ17R55 369 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 PAN2Q504Q3 1202 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 RINT1Q6NUQ1 792 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 KCNK18Q7Z418 384 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 ABI1Q8IZP0 508 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 LRRC43Q8N309 656 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 SYT2Q8N9I0 419 aaPredicted RBP11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 RASSF8Q8NHQ8 419 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 GDPD5Q8WTR4 605 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 IFT74Q96LB3 600 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 C11orf84Q9BUA3 381 aaPredicted RBP11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 MRPL9Q9BYD2 267 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 CCSER1Q9C0I3 900 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 C17orf75Q9HAS0 396 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 DAXXQ9UER7 740 aaPredicted RBP11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 MRPL42Q9Y6G3 142 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 PHLPP2Q6ZVD8 1323 aa11.79□□□□□ -0.52
CDC42SE1-206ENST00000492796 TBKBP1A7MCY6 615 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 RFXAPO00287 272 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 PLA2G4BP0C869 781 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 ATF7P17544 494 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 PLCG1P19174 1290 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 MARCKSP29966 332 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 GATMP50440 423 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 SLC12A3P55017 1021 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 DMP1Q13316 513 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 GPM6BQ13491 265 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 STK38Q15208 465 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 AMHR2Q16671 573 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 PTPROQ16827 1216 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 NAALADL2Q58DX5 795 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 ATL3Q6DD88 541 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 C1orf186Q6ZWK4 172 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 KRI1Q8N9T8 703 aaKnown RBP11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 SPRYD3Q8NCJ5 442 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 RNF169Q8NCN4 708 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 LINC00301Q8NCQ3 95 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 CNNM3Q8NE01 707 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 DEPTORQ8TB45 409 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 BSNDQ8WZ55 320 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 P2RX5Q93086 422 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 RUSC1Q9BVN2 902 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 CSRNP2Q9H175 543 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 AAASQ9NRG9 546 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 RNF19AQ9NV58 838 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 CCDC39Q9UFE4 941 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 KCNG1Q9UIX4 513 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 PCDHB2Q9Y5E7 798 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 MTCH2Q9Y6C9 303 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 COL6A3P12111 3177 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 CNTNAP2Q9UHC6 1331 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 MYH11P35749 1972 aa11.78□□□□□ -0.52
CDC42SE1-206ENST00000492796 HIP1RO75146 1068 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 PPP6R2O75170 966 aa11.77□□□□□ -0.53
CDC42SE1-206ENST00000492796 YEATS4O95619 227 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms