RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 PRELPP51888 382 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 COG7P83436 770 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ATG16L1Q676U5 607 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CREG2Q8IUH2 290 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 MIS12Q9H081 205 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 PXDNQ92626 1479 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TCRBV5S4A2TA0A5A2 114 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 LRRIQ4A6NIV6 560 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SLC26A4O43511 780 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ARL4CP56559 192 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 DYDC2Q96IM9 177 aa22.55■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 RTN2O75298 545 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 DLGAP5Q15398 846 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 LONRF1Q17RB8 773 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 GNPTABQ3T906 1256 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CEP120Q8N960 986 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CENPKQ9BS16 269 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 FOXP2O15409 715 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 PPP2R5DQ14738 602 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 QRICH1Q2TAL8 776 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 MEI1Q5TIA1 1274 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ST13P4Q8IZP2 240 aaPredicted RBP22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ADAM22Q9P0K1 906 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 NAGPAQ9UK23 515 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ATP6V0A1Q93050 837 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 EYA4O95677 639 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TMEM191BP0C7N4 346 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 POLGP54098 1239 aaPredicted RBP22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SLC29A2Q14542 456 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ACTRT1Q8TDG2 376 aa22.54■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ZWINTO95229 277 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 LRRC23Q53EV4 343 aaPredicted RBP22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SYDE1Q6ZW31 735 aaPredicted RBP22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 PABPC3Q9H361 631 aaKnown RBP22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 APEX2Q9UBZ4 518 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SRP68Q9UHB9 627 aaKnown RBP22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ECM2O94769 699 aaPredicted RBP22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 IZUMO3Q5VZ72 239 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 AGGF1Q8N302 714 aaeCLIP22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TTC17Q96AE7 1141 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 THEGQ9P2T0 379 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 DCTN4Q9UJW0 460 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 EIF4E1BA6NMX2 242 aaKnown RBP22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 GOLGA8SH3BPF8 625 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CDH16O75309 829 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ITIH2P19823 946 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 GRB10Q13322 594 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 GEN1Q17RS7 908 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ZNF354CQ86Y25 554 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 LRRC34Q8IZ02 419 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 MTMR8Q96EF0 704 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SH3GL3Q99963 347 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 PDE1BQ01064 536 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 ITIH4Q14624 930 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 COL23A1Q86Y22 540 aaPredicted RBP22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 IFT122Q9HBG6 1241 aa22.53■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 PEX3P56589 373 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 EIF2AK1Q9BQI3 630 aaKnown RBP22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CARD9Q9H257 536 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 MAD2L2Q9UI95 211 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 NWD1Q149M9 1564 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 EMSYQ7Z589 1322 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 PFDN1O60925 122 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CPP00450 1065 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 FMO5P49326 533 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CRYMQ14894 314 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 KLHL38Q2WGJ6 581 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 PADI6Q6TGC4 694 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 KDM4CQ9H3R0 1056 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SENP1Q9P0U3 644 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 TMEM120BA0PK00 339 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SPAG7O75391 227 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CEP170P1Q96L14 293 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 REEP2Q9BRK0 252 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 CD209Q9NNX6 404 aa22.52■■□□□ 1.2
CHKB-CPT1B-203ENST00000492556 SPECC1L-ADORA2AF8WAN1 911 aa22.52■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 GARSP41250 739 aaKnown RBP22.52■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 PCGF5Q86SE9 256 aa22.52■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 ATL2Q8NHH9 583 aa22.52■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 PPARGC1AQ9UBK2 798 aaKnown RBP22.52■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 IGF2BP3O00425 579 aaKnown RBP eCLIP22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 ARFIP2P53365 341 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 NXNQ6DKJ4 435 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 DARS2Q6PI48 645 aaKnown RBP22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 GSDMBQ8TAX9 411 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 TRAIPQ9BWF2 469 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 TLR10Q9BXR5 811 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 ESYT2A0FGR8 921 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 KCNQ4P56696 695 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 ZBTB8OSQ8IWT0 167 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 EHD4Q9H223 541 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 FSBPO95073 299 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 SMARCA1P28370 1054 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 NMT1P30419 496 aaKnown RBP22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 ABCD1P33897 745 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 CSRNP1Q96S65 589 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 CYTH2Q99418 400 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 PACSIN1Q9BY11 444 aa22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 TTC7AQ9ULT0 858 aaPredicted RBP22.51■■□□□ 1.19
CHKB-CPT1B-203ENST00000492556 PPEF1O14829 653 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms