RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 DNAJB1P25685 340 aa26.34■■□□□ 1.81
CTDSP1-211ENST00000492545 RPA1P27694 616 aa26.34■■□□□ 1.81
CTDSP1-211ENST00000492545 NCBP1Q09161 790 aaKnown RBP26.34■■□□□ 1.81
CTDSP1-211ENST00000492545 HYAL1Q12794 435 aa26.34■■□□□ 1.81
CTDSP1-211ENST00000492545 CLLU1OSQ5K130 101 aa26.34■■□□□ 1.81
CTDSP1-211ENST00000492545 LRRC55Q6ZSA7 311 aa26.34■■□□□ 1.81
CTDSP1-211ENST00000492545 CATSPER3Q86XQ3 398 aa26.34■■□□□ 1.81
CTDSP1-211ENST00000492545 IFNLR1Q8IU57 520 aaPredicted RBP26.34■■□□□ 1.81
CTDSP1-211ENST00000492545 TBC1D32Q96NH3 1257 aa26.34■■□□□ 1.81
CTDSP1-211ENST00000492545 CLDND1Q9NY35 253 aa26.34■■□□□ 1.81
CTDSP1-211ENST00000492545 DBR1Q9UK59 544 aaKnown RBP26.34■■□□□ 1.81
CTDSP1-211ENST00000492545 FSD2A1L4K1 749 aa26.33■■□□□ 1.81
CTDSP1-211ENST00000492545 AXLP30530 894 aa26.33■■□□□ 1.81
CTDSP1-211ENST00000492545 ARL2P36404 184 aa26.33■■□□□ 1.81
CTDSP1-211ENST00000492545 PTENP60484 403 aa26.33■■□□□ 1.81
CTDSP1-211ENST00000492545 KRT17Q04695 432 aa26.33■■□□□ 1.81
CTDSP1-211ENST00000492545 KCNT2Q6UVM3 1135 aa26.33■■□□□ 1.81
CTDSP1-211ENST00000492545 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.33■■□□□ 1.81
CTDSP1-211ENST00000492545 ZNF558Q96NG5 402 aa26.33■■□□□ 1.81
CTDSP1-211ENST00000492545 NFKBIZQ9BYH8 718 aa26.33■■□□□ 1.81
CTDSP1-211ENST00000492545 TLR9Q9NR96 1032 aa26.33■■□□□ 1.81
CTDSP1-211ENST00000492545 BMP2KQ9NSY1 1161 aaPredicted RBP26.33■■□□□ 1.81
CTDSP1-211ENST00000492545 FXR2P51116 673 aaKnown RBP eCLIP26.32■■□□□ 1.8
CTDSP1-211ENST00000492545 PDIA5Q14554 519 aa26.32■■□□□ 1.8
CTDSP1-211ENST00000492545 HAUS3Q68CZ6 603 aa26.32■■□□□ 1.8
CTDSP1-211ENST00000492545 PTCRAQ6ISU1 281 aaPredicted RBP26.32■■□□□ 1.8
CTDSP1-211ENST00000492545 GLB1LQ6UWU2 654 aa26.32■■□□□ 1.8
CTDSP1-211ENST00000492545 EP400NLQ6ZTU2 488 aa26.32■■□□□ 1.8
CTDSP1-211ENST00000492545 MCPH1Q8NEM0 835 aa26.32■■□□□ 1.8
CTDSP1-211ENST00000492545 HELQQ8TDG4 1101 aa26.32■■□□□ 1.8
CTDSP1-211ENST00000492545 MICAL1Q8TDZ2 1067 aa26.32■■□□□ 1.8
CTDSP1-211ENST00000492545 PIGOQ8TEQ8 1089 aa26.32■■□□□ 1.8
CTDSP1-211ENST00000492545 RAB34Q9BZG1 259 aa26.32■■□□□ 1.8
CTDSP1-211ENST00000492545 GRXCR2A6NFK2 248 aa26.31■■□□□ 1.8
CTDSP1-211ENST00000492545 LAD1O00515 517 aa26.31■■□□□ 1.8
CTDSP1-211ENST00000492545 ERLIN2O94905 339 aa26.31■■□□□ 1.8
CTDSP1-211ENST00000492545 C4orf32Q8N8J7 132 aa26.31■■□□□ 1.8
CTDSP1-211ENST00000492545 CNNM3Q8NE01 707 aa26.31■■□□□ 1.8
CTDSP1-211ENST00000492545 MRPS27Q92552 414 aaKnown RBP26.31■■□□□ 1.8
CTDSP1-211ENST00000492545 CCDC51Q96ER9 411 aa26.31■■□□□ 1.8
CTDSP1-211ENST00000492545 NECAB3Q96P71 396 aaPredicted RBP26.31■■□□□ 1.8
CTDSP1-211ENST00000492545 MINDY3Q9H8M7 445 aa26.31■■□□□ 1.8
CTDSP1-211ENST00000492545 SPG21Q9NZD8 308 aa26.31■■□□□ 1.8
CTDSP1-211ENST00000492545 PCDHB2Q9Y5E7 798 aa26.31■■□□□ 1.8
CTDSP1-211ENST00000492545 TCF20Q9UGU0 1960 aaKnown RBP26.3■■□□□ 1.8
CTDSP1-211ENST00000492545 MED24O75448 989 aa26.3■■□□□ 1.8
CTDSP1-211ENST00000492545 HOXA11P31270 313 aaPredicted RBP26.3■■□□□ 1.8
CTDSP1-211ENST00000492545 ALDH7A1P49419 539 aaKnown RBP26.3■■□□□ 1.8
CTDSP1-211ENST00000492545 ADAM15Q13444 863 aa26.3■■□□□ 1.8
CTDSP1-211ENST00000492545 MRPL10Q7Z7H8 261 aaKnown RBP26.3■■□□□ 1.8
CTDSP1-211ENST00000492545 CDCA3Q99618 268 aaPredicted RBP26.3■■□□□ 1.8
CTDSP1-211ENST00000492545 HCSTQ9UBK5 93 aa26.3■■□□□ 1.8
CTDSP1-211ENST00000492545 H3BQ06 376 aaPredicted RBP26.29■■□□□ 1.8
CTDSP1-211ENST00000492545 IRS1P35568 1242 aa26.29■■□□□ 1.8
CTDSP1-211ENST00000492545 LTBRP36941 435 aa26.29■■□□□ 1.8
CTDSP1-211ENST00000492545 TOB1P50616 345 aaPredicted RBP26.29■■□□□ 1.8
CTDSP1-211ENST00000492545 EFHBQ8N7U6 833 aa26.29■■□□□ 1.8
CTDSP1-211ENST00000492545 IGFLR1Q9H665 355 aa26.29■■□□□ 1.8
CTDSP1-211ENST00000492545 TLE6Q9H808 572 aa26.29■■□□□ 1.8
CTDSP1-211ENST00000492545 NGRNQ9NPE2 291 aaKnown RBP26.29■■□□□ 1.8
CTDSP1-211ENST00000492545 UBN1Q9NPG3 1134 aa26.29■■□□□ 1.8
CTDSP1-211ENST00000492545 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.29■■□□□ 1.8
CTDSP1-211ENST00000492545 PTGDRQ13258 359 aa26.28■■□□□ 1.8
CTDSP1-211ENST00000492545 RILPL1Q5EBL4 403 aa26.28■■□□□ 1.8
CTDSP1-211ENST00000492545 NOMO2Q5JPE7 1267 aa26.28■■□□□ 1.8
CTDSP1-211ENST00000492545 NOTUMQ6P988 496 aa26.28■■□□□ 1.8
CTDSP1-211ENST00000492545 KANSL3Q9P2N6 904 aa26.28■■□□□ 1.8
CTDSP1-211ENST00000492545 LRWD1Q9UFC0 647 aa26.28■■□□□ 1.8
CTDSP1-211ENST00000492545 CNTNAP2Q9UHC6 1331 aa26.28■■□□□ 1.8
CTDSP1-211ENST00000492545 INO80B-WBP1J3KQ70 363 aa26.27■■□□□ 1.8
CTDSP1-211ENST00000492545 FSCN2O14926 492 aa26.27■■□□□ 1.8
CTDSP1-211ENST00000492545 OFD1O75665 1012 aa26.27■■□□□ 1.8
CTDSP1-211ENST00000492545 GLRA2P23416 452 aa26.27■■□□□ 1.8
CTDSP1-211ENST00000492545 PRPHP41219 470 aa26.27■■□□□ 1.8
CTDSP1-211ENST00000492545 CAPSQ13938 189 aa26.27■■□□□ 1.8
CTDSP1-211ENST00000492545 SLC39A11Q8N1S5 342 aa26.27■■□□□ 1.8
CTDSP1-211ENST00000492545 ASAP3Q8TDY4 903 aa26.27■■□□□ 1.8
CTDSP1-211ENST00000492545 DAXXQ9UER7 740 aaPredicted RBP26.27■■□□□ 1.8
CTDSP1-211ENST00000492545 KIAA1671Q9BY89 1806 aa26.27■■□□□ 1.8
CTDSP1-211ENST00000492545 H3BQV1 296 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 USO1O60763 962 aaKnown RBP26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 CSPG5O95196 566 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 NCLP19338 710 aaKnown RBP26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 GJB2P29033 226 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 NRIP1P48552 1158 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 ERVFC1P60507 584 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 BMS1Q14692 1282 aaKnown RBP26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 MCTP1Q6DN14 999 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 POTEGQ6S5H5 508 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 FAM178BQ8IXR5 827 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 URGCPQ8TCY9 931 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 LPPQ93052 612 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 POLR3FQ9H1D9 316 aaPredicted RBP26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 PRKAG3Q9UGI9 489 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 SMC3Q9UQE7 1217 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 PCDHB6Q9Y5E3 794 aa26.26■■□□□ 1.79
CTDSP1-211ENST00000492545 A0A087WWV3 80 aa26.25■■□□□ 1.79
CTDSP1-211ENST00000492545 ARHGEF35A5YM69 484 aa26.25■■□□□ 1.79
CTDSP1-211ENST00000492545 TSPAN1O60635 241 aa26.25■■□□□ 1.79
CTDSP1-211ENST00000492545 CD2BP2O95400 341 aaKnown RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms