RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 PHKA2P46019 1235 aa17.65■□□□□ 0.42
CDK11A-220ENST00000492390 RBM25P49756 843 aaKnown RBP17.65■□□□□ 0.42
CDK11A-220ENST00000492390 GPC3P51654 580 aa17.65■□□□□ 0.42
CDK11A-220ENST00000492390 RNASELQ05823 741 aaKnown RBP17.65■□□□□ 0.42
CDK11A-220ENST00000492390 NOMO2Q5JPE7 1267 aa17.65■□□□□ 0.42
CDK11A-220ENST00000492390 GLB1LQ6UWU2 654 aa17.65■□□□□ 0.42
CDK11A-220ENST00000492390 LY9Q9HBG7 655 aa17.65■□□□□ 0.42
CDK11A-220ENST00000492390 MRPL17Q9NRX2 175 aaKnown RBP17.65■□□□□ 0.42
CDK11A-220ENST00000492390 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDK11A-220ENST00000492390 CHD8Q9HCK8 2581 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 DCDC2BA2VCK2 349 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 LAMTOR5O43504 91 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 LAMP2P13473 410 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 ZNF76P36508 570 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 SLC11A1P49279 550 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 TRMT1LQ7Z2T5 733 aaKnown RBP17.64■□□□□ 0.41
CDK11A-220ENST00000492390 HEATR3Q7Z4Q2 680 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 CMTR1Q8N1G2 835 aaKnown RBP17.64■□□□□ 0.41
CDK11A-220ENST00000492390 ATRIPQ8WXE1 791 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 SCLT1Q96NL6 688 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 MTA3Q9BTC8 594 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 ANO3Q9BYT9 981 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 BCO2Q9BYV7 579 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 FOXQ1Q9C009 403 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 ANO2Q9NQ90 1003 aa17.64■□□□□ 0.41
CDK11A-220ENST00000492390 hCG_1642624A0A1W2PR95 340 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 ANHXE9PGG2 379 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 INPPL1O15357 1258 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 SSBP05455 408 aaKnown RBP eCLIP17.63■□□□□ 0.41
CDK11A-220ENST00000492390 FGFR4P22455 802 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 SREBF1P36956 1147 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 MB21D2Q8IYB1 491 aaPredicted RBP17.63■□□□□ 0.41
CDK11A-220ENST00000492390 SMAP1Q8IYB5 467 aaPredicted RBP17.63■□□□□ 0.41
CDK11A-220ENST00000492390 TMTC2Q8N394 836 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 LRRC71Q8N4P6 559 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 PGBD1Q96JS3 809 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 ZNF668Q96K58 619 aaPredicted RBP17.63■□□□□ 0.41
CDK11A-220ENST00000492390 FAM167AQ96KS9 214 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 LSG1Q9H089 658 aaKnown RBP17.63■□□□□ 0.41
CDK11A-220ENST00000492390 RIC8AQ9NPQ8 531 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 SPATA6Q9NWH7 488 aaPredicted RBP17.63■□□□□ 0.41
CDK11A-220ENST00000492390 DNAJB4Q9UDY4 337 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 SSX2IPQ9Y2D8 614 aa17.63■□□□□ 0.41
CDK11A-220ENST00000492390 USP24Q9UPU5 2620 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 IPO5O00410 1097 aaKnown RBP17.62■□□□□ 0.41
CDK11A-220ENST00000492390 LRRN2O75325 713 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 OFD1O75665 1012 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 PAPLNO95428 1278 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 ADH1AP07327 375 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 PSAPP07602 524 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 CALM1P0DP23 149 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 CALM2P0DP24 149 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 CALM3P0DP25 149 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 HTR4Q13639 388 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 ZNF746Q6NUN9 644 aaPredicted RBP17.62■□□□□ 0.41
CDK11A-220ENST00000492390 PLA2G4DQ86XP0 818 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 ZBTB44Q8NCP5 570 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 HDAC7Q8WUI4 952 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 NLRP7Q8WX94 980 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 SMG7Q92540 1137 aaKnown RBP17.62■□□□□ 0.41
CDK11A-220ENST00000492390 LPPQ93052 612 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 CHAMP1Q96JM3 812 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 GBP3Q9H0R5 595 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 EPC1Q9H2F5 836 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 TBC1D22BQ9NU19 505 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 SMG5Q9UPR3 1016 aaKnown RBP17.62■□□□□ 0.41
CDK11A-220ENST00000492390 INPP5FQ9Y2H2 1132 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 TAF6LQ9Y6J9 622 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 DOCK8Q8NF50 2099 aa17.62■□□□□ 0.41
CDK11A-220ENST00000492390 CFAP47Q6ZTR5 3102 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 MYH9P35579 1960 aaKnown RBP17.61■□□□□ 0.41
CDK11A-220ENST00000492390 KANSL1LA0AUZ9 987 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 ZNF623O75123 536 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 GLUD1P00367 558 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 ALDH2P05091 517 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 TGM1P22735 817 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 MAGEA9P43362 315 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 RAB27AP51159 221 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 CDC42EP1Q00587 391 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 AP3B2Q13367 1082 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 TWF2Q6IBS0 349 aaKnown RBP17.61■□□□□ 0.41
CDK11A-220ENST00000492390 ZNF280BQ86YH2 543 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 RPS6KC1Q96S38 1066 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 TMEM175Q9BSA9 504 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 DDX23Q9BUQ8 820 aaKnown RBP17.61■□□□□ 0.41
CDK11A-220ENST00000492390 GCOM2Q9BZD3 368 aaPredicted RBP17.61■□□□□ 0.41
CDK11A-220ENST00000492390 OSBPL6Q9BZF3 934 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 ZSCAN32Q9NX65 697 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 GABBR1Q9UBS5 961 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 USP18Q9UMW8 372 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 PCDHA10Q9Y5I2 948 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 BAHCC1Q9P281 2608 aa17.61■□□□□ 0.41
CDK11A-220ENST00000492390 CCDC69A6NI79 296 aa17.6■□□□□ 0.41
CDK11A-220ENST00000492390 FAM86B1E9PN63 330 aa17.6■□□□□ 0.41
CDK11A-220ENST00000492390 TEX28O15482 410 aa17.6■□□□□ 0.41
CDK11A-220ENST00000492390 TBC1D4O60343 1298 aa17.6■□□□□ 0.41
CDK11A-220ENST00000492390 LILRB5O75023 590 aa17.6■□□□□ 0.41
CDK11A-220ENST00000492390 CSDE1O75534 798 aaKnown RBP17.6■□□□□ 0.41
CDK11A-220ENST00000492390 RFPL2O75678 378 aa17.6■□□□□ 0.41
CDK11A-220ENST00000492390 C1RP00736 705 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms