RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ELAC1Q9H777 363 aaKnown RBP9.98□□□□□ -0.81
HDAC3-211ENST00000491581 NRDE2Q9H7Z3 1164 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 GPRC5CQ9NQ84 441 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 ENTPD7Q9NQZ7 604 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 HES2Q9Y543 173 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 KMT2EQ8IZD2 1858 aa9.98□□□□□ -0.81
HDAC3-211ENST00000491581 A0A0U1RQF3 1178 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 TTLL13PA6NNM8 815 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 B4GALT5O43286 388 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 GPR37L1O60883 481 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 SLITRK3O94933 977 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 SSBP05455 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
HDAC3-211ENST00000491581 ATXN8OSP0DMR3 200 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 LAG3P18627 525 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 HOXA11P31270 313 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-211ENST00000491581 YWHABP31946 246 aaKnown RBP9.97□□□□□ -0.81
HDAC3-211ENST00000491581 TECP42680 631 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 TXKP42681 527 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 SLC11A1P49279 550 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 POLGP54098 1239 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-211ENST00000491581 LAMTOR4Q0VGL1 99 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 XKR9Q5GH70 373 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 PPP4R3AQ6IN85 833 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 MOXD1Q6UVY6 613 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 AGMOQ6ZNB7 445 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 HFE2Q6ZVN8 426 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 CATSPER4Q7RTX7 472 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 DIS3L2Q8IYB7 885 aaKnown RBP9.97□□□□□ -0.81
HDAC3-211ENST00000491581 ABI1Q8IZP0 508 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 ZNF558Q96NG5 402 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 KIF2CQ99661 725 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 EIF2AK1Q9BQI3 630 aaKnown RBP9.97□□□□□ -0.81
HDAC3-211ENST00000491581 GCOM2Q9BZD3 368 aaPredicted RBP9.97□□□□□ -0.81
HDAC3-211ENST00000491581 DHX33Q9H6R0 707 aaKnown RBP9.97□□□□□ -0.81
HDAC3-211ENST00000491581 FAM105AQ9NUU6 356 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 TBC1D13Q9NVG8 400 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 MIOSQ9NXC5 875 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 COL4A3BPQ9Y5P4 624 aa9.97□□□□□ -0.81
HDAC3-211ENST00000491581 DENND4AQ7Z401 1863 aa9.96□□□□□ -0.81
HDAC3-211ENST00000491581 EPB41L2O43491 1005 aaKnown RBP9.96□□□□□ -0.82
HDAC3-211ENST00000491581 DCXO43602 365 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 MARCH6O60337 910 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 OFD1O75665 1012 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 CDKL5O76039 1030 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 EYA4O95677 639 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 POMCP01189 267 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 EDN1P05305 212 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 P4HBP07237 508 aaKnown RBP9.96□□□□□ -0.82
HDAC3-211ENST00000491581 EPCAMP16422 314 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 IGFBP6P24592 240 aaPredicted RBP9.96□□□□□ -0.82
HDAC3-211ENST00000491581 MCM7P33993 719 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 EMC2Q15006 297 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 EPHA7Q15375 998 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 NAALADL2Q58DX5 795 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 TAS1R1Q7RTX1 841 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 TMC7Q7Z402 723 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 LRRC43Q8N309 656 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 RNF149Q8NC42 400 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 SMG8Q8ND04 991 aaKnown RBP9.96□□□□□ -0.82
HDAC3-211ENST00000491581 RDM1Q8NG50 284 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 B3GALT6Q96L58 329 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 APOL6Q9BWW8 343 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 C22orf23Q9BZE7 217 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 S1PR5Q9H228 398 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 SPG21Q9NZD8 308 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 PCDHB2Q9Y5E7 798 aa9.96□□□□□ -0.82
HDAC3-211ENST00000491581 C2orf71A6NGG8 1288 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 TSPAN1O60635 241 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 CLASP2O75122 1294 aaKnown RBP9.95□□□□□ -0.82
HDAC3-211ENST00000491581 MED24O75448 989 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 PDGFBP01127 241 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-211ENST00000491581 GALTP07902 379 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 PLA2G5P39877 138 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 ANAPC15P60006 121 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 PLCB3Q01970 1234 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 COASYQ13057 564 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 CAPSQ13938 189 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 ZNF174Q15697 407 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 CALCRLQ16602 461 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 ECM1Q16610 540 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 GALNT17Q6IS24 598 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 ANKRD54Q6NXT1 300 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 FERMT3Q86UX7 667 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 VPS52Q8N1B4 723 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 ST13P5Q8NFI4 369 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-211ENST00000491581 FAM20AQ96MK3 541 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 ZFP42Q96MM3 310 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 PHOX2BQ99453 314 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 TTC12Q9H892 705 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-211ENST00000491581 AAASQ9NRG9 546 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 AGPAT5Q9NUQ2 364 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 KLK14Q9P0G3 267 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 HCFC2Q9Y5Z7 792 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 COL4A3Q01955 1670 aa9.95□□□□□ -0.82
HDAC3-211ENST00000491581 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-211ENST00000491581 LOC730098B7Z3J9 87 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 C2CD2LO14523 706 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 USO1O60763 962 aaKnown RBP9.94□□□□□ -0.82
HDAC3-211ENST00000491581 CXCL14O95715 111 aa9.94□□□□□ -0.82
HDAC3-211ENST00000491581 SPATA31C1P0DKV0 1188 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms