RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 FHOD1Q9Y613 1164 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 IGSF9BQ9UPX0 1349 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 PSMD10O75832 226 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 SLC9A1P19634 815 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 PON1P27169 355 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 YARSP54577 528 aaKnown RBP7.92□□□□□ -1.14
NPHP3-208ENST00000490993 HERVK_113P62684 666 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 LACTBP83111 547 aaPredicted RBP7.92□□□□□ -1.14
NPHP3-208ENST00000490993 NFRKBQ6P4R8 1299 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 TAOK1Q7L7X3 1001 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 KCNK18Q7Z418 384 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 DPP9Q86TI2 863 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 MMP19Q99542 508 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.92□□□□□ -1.141e-7■□□□□ 9.6
NPHP3-208ENST00000490993 TRIM31Q9BZY9 425 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 VIPAS39Q9H9C1 493 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 SPON1Q9HCB6 807 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 RNF181Q9P0P0 153 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 USTQ9Y2C2 406 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 CLDN3O15551 220 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 RTN2O75298 545 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 GGPS1O95749 300 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 DSG3P32926 999 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 GUCY2FP51841 1108 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 GPR162Q16538 588 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 MAPK6Q16659 721 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 KYAT1Q16773 422 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 CCDC25Q86WR0 208 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 HACE1Q8IYU2 909 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 PSPC1Q8WXF1 523 aaKnown RBP7.92□□□□□ -1.14
NPHP3-208ENST00000490993 FAM213AQ9BRX8 229 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 MRPL4Q9BYD3 311 aaKnown RBP7.92□□□□□ -1.14
NPHP3-208ENST00000490993 RSPH14Q9UHP6 348 aa7.92□□□□□ -1.14
NPHP3-208ENST00000490993 INO80B-WBP1J3KQ70 363 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 NEBLO76041 1014 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 GTF2H1P32780 548 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 NOVP48745 357 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 PSMC6P62333 389 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 PGM5Q15124 567 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 DPH6Q7L8W6 267 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 MMGT1Q8N4V1 131 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 SPATA4Q8NEY3 305 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 PDCD2LQ9BRP1 358 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 INO80BQ9C086 356 aaPredicted RBP7.91□□□□□ -1.14
NPHP3-208ENST00000490993 HSD3B7Q9H2F3 369 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 SLITRK6Q9H5Y7 841 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 AIPL1Q9NZN9 384 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 PPME1Q9Y570 386 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 TMEM253P0C7T8 217 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 ACTN1P12814 892 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 RWDD2BP57060 319 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 R3HDM1Q15032 1099 aaKnown RBP7.91□□□□□ -1.14
NPHP3-208ENST00000490993 SNRNP35Q16560 246 aaKnown RBP7.91□□□□□ -1.14
NPHP3-208ENST00000490993 ANKS4BQ8N8V4 417 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 DNERQ8NFT8 737 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 MAGOHBQ96A72 148 aaKnown RBP7.91□□□□□ -1.14
NPHP3-208ENST00000490993 WNT8AQ9H1J5 351 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 SLC38A10Q9HBR0 1119 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 TMEM8AQ9HCN3 771 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 AGO2Q9UKV8 859 aaKnown RBP7.91□□□□□ -1.14
NPHP3-208ENST00000490993 PCDHAC2Q9Y5I4 1007 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 A0A1W2PRG0 241 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 RSPH10B2B2RC85 870 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 M0QZ92 97 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 VWA5AO00534 786 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 PODXLO00592 558 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 RSPH10BP0C881 870 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 STAT5BP51692 787 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 NPEPPSP55786 919 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 MARSP56192 900 aaKnown RBP7.91□□□□□ -1.14
NPHP3-208ENST00000490993 SH3BP5LQ7L8J4 393 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 ZNF710Q8N1W2 664 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 ATRIPQ8WXE1 791 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 MMS19Q96T76 1030 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 RPF1Q9H9Y2 349 aaKnown RBP7.91□□□□□ -1.14
NPHP3-208ENST00000490993 TBX20Q9UMR3 447 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 SIK3Q9Y2K2 1263 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 AKAP11Q9UKA4 1901 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 MAST2Q6P0Q8 1798 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 NFIBO00712 420 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 XPOTO43592 962 aaKnown RBP7.91□□□□□ -1.14
NPHP3-208ENST00000490993 GAS2O43903 313 aaKnown RBP7.91□□□□□ -1.14
NPHP3-208ENST00000490993 EVI5O60447 810 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 H2AFXP16104 143 aaPredicted RBP7.91□□□□□ -1.14
NPHP3-208ENST00000490993 INPP5BP32019 993 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 PRKCEQ02156 737 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 MXD4Q14582 209 aaPredicted RBP7.91□□□□□ -1.14
NPHP3-208ENST00000490993 BMT2Q1RMZ1 405 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 MIIPQ5JXC2 388 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 LRRC55Q6ZSA7 311 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 CCHCR1Q8TD31 782 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 SEPT1Q8WYJ6 367 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 GDAP1L1Q96MZ0 367 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 MBOAT7Q96N66 472 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 CAMKK2Q96RR4 588 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 SELENOSQ9BQE4 189 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 WDR18Q9BV38 432 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 TRIM10Q9UDY6 481 aa7.91□□□□□ -1.14
NPHP3-208ENST00000490993 TLDC2A0PJX2 215 aa7.9□□□□□ -1.14
NPHP3-208ENST00000490993 IQCA1LA6NCM1 817 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms