RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 MBTD1Q05BQ5 628 aa17.05■□□□□ 0.32
VPS26A-207ENST00000490696 PKP1Q13835 747 aa17.05■□□□□ 0.32
VPS26A-207ENST00000490696 PCBP1Q15365 356 aaKnown RBP eCLIP17.05■□□□□ 0.32
VPS26A-207ENST00000490696 EPC2Q52LR7 807 aa17.05■□□□□ 0.32
VPS26A-207ENST00000490696 CDCA2Q69YH5 1023 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-207ENST00000490696 ZNF598Q86UK7 904 aaKnown RBP17.05■□□□□ 0.32
VPS26A-207ENST00000490696 TMEM192Q8IY95 271 aa17.05■□□□□ 0.32
VPS26A-207ENST00000490696 MAFAQ8NHW3 353 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-207ENST00000490696 SAMD11Q96NU1 681 aa17.05■□□□□ 0.32
VPS26A-207ENST00000490696 PLIN2Q99541 437 aa17.05■□□□□ 0.32
VPS26A-207ENST00000490696 RUSC1Q9BVN2 902 aa17.05■□□□□ 0.32
VPS26A-207ENST00000490696 SRPRBQ9Y5M8 271 aaKnown RBP17.05■□□□□ 0.32
VPS26A-207ENST00000490696 FGFR1P11362 822 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 IGFBP4P22692 258 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 SLC39A14Q15043 492 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 AMHR2Q16671 573 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 PAN2Q504Q3 1202 aaKnown RBP17.04■□□□□ 0.32
VPS26A-207ENST00000490696 FOXD4L5Q5VV16 416 aaPredicted RBP17.04■□□□□ 0.32
VPS26A-207ENST00000490696 TWF2Q6IBS0 349 aaKnown RBP17.04■□□□□ 0.32
VPS26A-207ENST00000490696 RINT1Q6NUQ1 792 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 C1orf186Q6ZWK4 172 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.04■□□□□ 0.32
VPS26A-207ENST00000490696 FBXO22Q8NEZ5 403 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 LRRC15Q8TF66 581 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 GDPD5Q8WTR4 605 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 FOXD4L4Q8WXT5 416 aaPredicted RBP17.04■□□□□ 0.32
VPS26A-207ENST00000490696 KIFAP3Q92845 792 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 CDK5RAP3Q96JB5 506 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 CSRNP2Q9H175 543 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 POLD4Q9HCU8 107 aa17.04■□□□□ 0.32
VPS26A-207ENST00000490696 MRPL42Q9Y6G3 142 aaKnown RBP17.04■□□□□ 0.32
VPS26A-207ENST00000490696 FNDC1Q4ZHG4 1894 aaPredicted RBP17.03■□□□□ 0.32
VPS26A-207ENST00000490696 LRRIQ4A6NIV6 560 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 TBKBP1A7MCY6 615 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 INO80B-WBP1J3KQ70 363 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 TSPAN1O60635 241 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 ZNF623O75123 536 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 ERLIN2O94905 339 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 EOMESO95936 686 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 F13A1P00488 732 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 SLC12A3P55017 1021 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 DAW1Q8N136 415 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 SYT2Q8N9I0 419 aaPredicted RBP17.03■□□□□ 0.32
VPS26A-207ENST00000490696 FAM105AQ9NUU6 356 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 MTCH2Q9Y6C9 303 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 PRUNE2Q8WUY3 3088 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 COL4A4P53420 1690 aaPredicted RBP17.03■□□□□ 0.32
VPS26A-207ENST00000490696 NLRC5Q86WI3 1866 aa17.03■□□□□ 0.32
VPS26A-207ENST00000490696 MYH15Q9Y2K3 1946 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 RALGAPA2Q2PPJ7 1873 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 C5orf67F2Z3F1 127 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 HOXA2O43364 376 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 PLA2G4BP0C869 781 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 SKIP12755 728 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 AXLP30530 894 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 BMPR1AP36894 532 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 NAMPTP43490 491 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 RAB27AP51159 221 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 MAPK7Q13164 816 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 KARSQ15046 597 aaKnown RBP17.02■□□□□ 0.32
VPS26A-207ENST00000490696 PPP2R5AQ15172 486 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 CLLU1OSQ5K130 101 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 SPECC1Q5M775 1068 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 UBXN11Q5T124 520 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 USP49Q70CQ1 688 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 LINC00301Q8NCQ3 95 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 CALML4Q96GE6 196 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 EPSTI1Q96J88 318 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 ZNF396Q96N95 335 aaPredicted RBP17.02■□□□□ 0.32
VPS26A-207ENST00000490696 CLIC6Q96NY7 704 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 CASD1Q96PB1 797 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 TMEM117Q9H0C3 514 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 BLOC1S4Q9NUP1 217 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 RWDD3Q9Y3V2 267 aa17.02■□□□□ 0.32
VPS26A-207ENST00000490696 H3BNC9 293 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 HIP1RO75146 1068 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 RB1P06400 928 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 ARF4P18085 180 aaPredicted RBP17.01■□□□□ 0.31
VPS26A-207ENST00000490696 PLCG1P19174 1290 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 GUCY2CP25092 1073 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 CTNNB1P35222 781 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 FAM187BQ17R55 369 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 ZBTB8OSQ8IWT0 167 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 KRI1Q8N9T8 703 aaKnown RBP17.01■□□□□ 0.31
VPS26A-207ENST00000490696 RNF169Q8NCN4 708 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 SYMPKQ92797 1274 aaKnown RBP17.01■□□□□ 0.31
VPS26A-207ENST00000490696 CCDC51Q96ER9 411 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 CPB2Q96IY4 423 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 IFT74Q96LB3 600 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 TIPINQ9BVW5 301 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 C2orf40Q9H1Z8 148 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 FZD8Q9H461 694 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 TFIP11Q9UBB9 837 aaKnown RBP17.01■□□□□ 0.31
VPS26A-207ENST00000490696 PCDHB2Q9Y5E7 798 aa17.01■□□□□ 0.31
VPS26A-207ENST00000490696 MEIS3P2A8K0S8 358 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 B4GALT5O43286 388 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 GTPBP6O43824 516 aaPredicted RBP17■□□□□ 0.31
VPS26A-207ENST00000490696 YEATS4O95619 227 aa17■□□□□ 0.31
VPS26A-207ENST00000490696 SSBP05455 408 aaKnown RBP eCLIP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms