RNA–Protein interactions for RNA: ENST00000490500.5

RBBP4-213, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 3

Gene RBBP4, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-213ENST00000490500 IRAK3Q9Y616 596 aa13.9□□□□□ -0.18
RBBP4-213ENST00000490500 ZC3H11AO75152 810 aaKnown RBP eCLIP13.89□□□□□ -0.19
RBBP4-213ENST00000490500 CXCL14O95715 111 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 P4HBP07237 508 aaKnown RBP13.89□□□□□ -0.19
RBBP4-213ENST00000490500 GALTP07902 379 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 GCFC2P16383 781 aaKnown RBP13.89□□□□□ -0.19
RBBP4-213ENST00000490500 PTPN21Q16825 1174 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 LONRF3Q496Y0 759 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 NOMO2Q5JPE7 1267 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 GLB1LQ6UWU2 654 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 CATSPER4Q7RTX7 472 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 NEK8Q86SG6 692 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 DDX53Q86TM3 631 aaKnown RBP13.89□□□□□ -0.19
RBBP4-213ENST00000490500 VPS52Q8N1B4 723 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 PRSS33Q8NF86 280 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 BCL7CQ8WUZ0 217 aaPredicted RBP13.89□□□□□ -0.19
RBBP4-213ENST00000490500 TMEM169Q96HH4 297 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 IGSF21Q96ID5 467 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 NLRP4Q96MN2 994 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 DHX33Q9H6R0 707 aaKnown RBP13.89□□□□□ -0.19
RBBP4-213ENST00000490500 GJB4Q9NTQ9 266 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 AGPAT5Q9NUQ2 364 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 TBC1D13Q9NVG8 400 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 PPME1Q9Y570 386 aa13.89□□□□□ -0.19
RBBP4-213ENST00000490500 CCDC194A0A1B0GVG4 234 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 CARNS1A5YM72 827 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 TBX3O15119 743 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 B4GALT3O60512 393 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 DKC1O60832 514 aaKnown RBP eCLIP13.88□□□□□ -0.19
RBBP4-213ENST00000490500 DTNBO60941 627 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 CTSAP10619 480 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 HOXA11P31270 313 aaPredicted RBP13.88□□□□□ -0.19
RBBP4-213ENST00000490500 RAB27AP51159 221 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 POLGP54098 1239 aaPredicted RBP13.88□□□□□ -0.19
RBBP4-213ENST00000490500 ITIH3Q06033 890 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 EPHA7Q15375 998 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 EARS2Q5JPH6 523 aaKnown RBP13.88□□□□□ -0.19
RBBP4-213ENST00000490500 AGMOQ6ZNB7 445 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 MRPL10Q7Z7H8 261 aaKnown RBP13.88□□□□□ -0.19
RBBP4-213ENST00000490500 C4orf19Q8IY42 314 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 FBXL6Q8N531 539 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 OXER1Q8TDS5 423 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 SLC22A17Q8WUG5 538 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 PRPF31Q8WWY3 499 aaKnown RBP13.88□□□□□ -0.19
RBBP4-213ENST00000490500 AUTS2Q8WXX7 1259 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 SLC7A3Q8WY07 619 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 TMEM143Q96AN5 459 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 CEP170P1Q96L14 293 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 VN1R3Q9BXE9 311 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 POMKQ9H5K3 350 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 MINDY3Q9H8M7 445 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 TPCN1Q9ULQ1 816 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 PCDHB2Q9Y5E7 798 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 COL4A3BPQ9Y5P4 624 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 STK36Q9NRP7 1315 aa13.88□□□□□ -0.19
RBBP4-213ENST00000490500 PFKFB2O60825 505 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 CDKL5O76039 1030 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 CTDNEP1O95476 244 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 SP100P23497 879 aaPredicted RBP13.87□□□□□ -0.19
RBBP4-213ENST00000490500 RFC5P40937 340 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 SLC11A1P49279 550 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 AFF1P51825 1210 aaKnown RBP13.87□□□□□ -0.19
RBBP4-213ENST00000490500 SPIRE1Q08AE8 756 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 BMS1Q14692 1282 aaKnown RBP13.87□□□□□ -0.19
RBBP4-213ENST00000490500 UBXN11Q5T124 520 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 CES5AQ6NT32 575 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 PIK3AP1Q6ZUJ8 805 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 SRGAP1Q7Z6B7 1085 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 ZNF280BQ86YH2 543 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 SUGP1Q8IWZ8 645 aaKnown RBP13.87□□□□□ -0.19
RBBP4-213ENST00000490500 PSPC1Q8WXF1 523 aaKnown RBP13.87□□□□□ -0.19
RBBP4-213ENST00000490500 NECTIN4Q96NY8 510 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 SLKQ9H2G2 1235 aaPredicted RBP13.87□□□□□ -0.19
RBBP4-213ENST00000490500 RGL1Q9NZL6 768 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 DNAJB4Q9UDY4 337 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 INPP5FQ9Y2H2 1132 aa13.87□□□□□ -0.19
RBBP4-213ENST00000490500 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.86□□□□□ -0.19
RBBP4-213ENST00000490500 C2CD4DB7Z1M9 353 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 ZBTB39O15060 712 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 CCNT1O60563 726 aaKnown RBP13.86□□□□□ -0.19
RBBP4-213ENST00000490500 DDHD2O94830 711 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 WEE2P0C1S8 567 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 EPCAMP16422 314 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 YWHABP31946 246 aaKnown RBP13.86□□□□□ -0.19
RBBP4-213ENST00000490500 VCPP55072 806 aaKnown RBP13.86□□□□□ -0.19
RBBP4-213ENST00000490500 LAMTOR4Q0VGL1 99 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 TCF15Q12870 199 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 GIT2Q14161 759 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 KANK3Q6NY19 840 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 POTEDQ86YR6 584 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 EXOC8Q8IYI6 725 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 C12orf76Q8N812 135 aaPredicted RBP13.86□□□□□ -0.19
RBBP4-213ENST00000490500 FEZF2Q8TBJ5 459 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 PGBD4Q96DM1 585 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 PHOX2BQ99453 314 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 LXNQ9BS40 222 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 NR2E1Q9Y466 385 aa13.86□□□□□ -0.19
RBBP4-213ENST00000490500 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
RBBP4-213ENST00000490500 ASAP2O43150 1006 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms