RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 KIAA2012Q0VF49 1180 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 ODF1Q14990 250 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 NFE2Q16621 373 aaPredicted RBP5.22□□□□□ -1.57
CD46-216ENST00000490278 FBLN7Q53RD9 439 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 TMEM240Q5SV17 173 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 MBNL2Q5VZF2 373 aaKnown RBP5.22□□□□□ -1.57
CD46-216ENST00000490278 GPR155Q7Z3F1 870 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 FAM124AQ86V42 546 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 CPA6Q8N4T0 437 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 PPP1R14CQ8TAE6 165 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 ZSCAN18Q8TBC5 510 aaPredicted RBP5.22□□□□□ -1.57
CD46-216ENST00000490278 FATE1Q969F0 183 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 MBD6Q96DN6 1003 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 ACE2Q9BYF1 805 aaPredicted RBP5.22□□□□□ -1.57
CD46-216ENST00000490278 LUC7LQ9NQ29 371 aaKnown RBP5.22□□□□□ -1.57
CD46-216ENST00000490278 ZIM2Q9NZV7 527 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 IP6K2Q9UHH9 426 aa5.22□□□□□ -1.57
CD46-216ENST00000490278 DAPK3O43293 454 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 ZNF888P0CJ79 500 aaPredicted RBP5.21□□□□□ -1.58
CD46-216ENST00000490278 HNRNPLP14866 589 aaKnown RBP eCLIP5.21□□□□□ -1.58
CD46-216ENST00000490278 RRADP55042 308 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 GJA9P57773 515 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 CCT2P78371 535 aaKnown RBP5.21□□□□□ -1.58
CD46-216ENST00000490278 CD69Q07108 199 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 MGAT5Q09328 741 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 ADAM15Q13444 863 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 ADRM1Q16186 407 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 ZNF827Q17R98 1081 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 ZMAT1Q5H9K5 638 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 AGBL4Q5VU57 503 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 RALYLQ86SE5 291 aaKnown RBP5.21□□□□□ -1.58
CD46-216ENST00000490278 LPPQ93052 612 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 PAWRQ96IZ0 340 aaKnown RBP5.21□□□□□ -1.58
CD46-216ENST00000490278 SLC2A13Q96QE2 648 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 CAMKK2Q96RR4 588 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 KIAA1683Q9H0B3 1180 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 CDH19Q9H159 772 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 OR10A2Q9H208 303 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 TCF7L1Q9HCS4 588 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 ZNF180Q9UJW8 692 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 FAM184BQ9ULE4 1060 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 PTPN22Q9Y2R2 807 aa5.21□□□□□ -1.58
CD46-216ENST00000490278 NOBOXO60393 691 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 NDUFS2O75306 463 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 PARNO95453 639 aaKnown RBP5.2□□□□□ -1.58
CD46-216ENST00000490278 LY86O95711 162 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 CT47B1P0C2W7 299 aaPredicted RBP5.2□□□□□ -1.58
CD46-216ENST00000490278 ZSCAN20P17040 1043 aaPredicted RBP5.2□□□□□ -1.58
CD46-216ENST00000490278 C5AR1P21730 350 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 MALLQ13021 153 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 PPP2R5AQ15172 486 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 MUM1L1Q5H9M0 696 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 BTNL9Q6UXG8 535 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 C1QL4Q86Z23 238 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 SP8Q8IXZ3 490 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 KBTBD2Q8IY47 623 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 CMTR2Q8IYT2 770 aaKnown RBP5.2□□□□□ -1.58
CD46-216ENST00000490278 UNC5BQ8IZJ1 945 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.2□□□□□ -1.58
CD46-216ENST00000490278 JPH3Q8WXH2 748 aaPredicted RBP5.2□□□□□ -1.58
CD46-216ENST00000490278 UIMC1Q96RL1 719 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 RTFDC1Q9BY42 306 aaPredicted RBP5.2□□□□□ -1.58
CD46-216ENST00000490278 RHOBTB2Q9BYZ6 727 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 ZBTB21Q9ULJ3 1066 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 ANKRD6Q9Y2G4 727 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 GIT1Q9Y2X7 761 aa5.2□□□□□ -1.58
CD46-216ENST00000490278 CTDP1Q9Y5B0 961 aaPredicted RBP5.2□□□□□ -1.58
CD46-216ENST00000490278 A0A1W2PR48 441 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 GAAP10253 952 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 MEF2AQ02078 507 aaPredicted RBP5.19□□□□□ -1.58
CD46-216ENST00000490278 ZNF568Q3ZCX4 644 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 NT5DC1Q5TFE4 455 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 BORAQ6PGQ7 559 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 USP30Q70CQ3 517 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 CLEC14AQ86T13 490 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 FMNL3Q8IVF7 1028 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 CHPFQ8IZ52 775 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 PPM1NQ8N819 430 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 PLA2G15Q8NCC3 412 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 GLB1L3Q8NCI6 653 aaPredicted RBP5.19□□□□□ -1.58
CD46-216ENST00000490278 GCDHQ92947 438 aaPredicted RBP5.19□□□□□ -1.58
CD46-216ENST00000490278 HSPBAP1Q96EW2 488 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 GREM2Q9H772 168 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 CHPF2Q9P2E5 772 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 TUBD1Q9UJT1 453 aa5.19□□□□□ -1.58
CD46-216ENST00000490278 RBM8AQ9Y5S9 174 aaKnown RBP5.19□□□□□ -1.58
CD46-216ENST00000490278 C2orf78A6NCI8 922 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 TSPAN6O43657 245 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 MARCH6O60337 910 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 B4GALT3O60512 393 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 B4GALT4O60513 344 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 TRIM13O60858 407 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 RFPL1O75677 317 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 ZRANB2O95218 330 aaKnown RBP eCLIP5.18□□□□□ -1.58
CD46-216ENST00000490278 IL33O95760 270 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 SCGB1D2O95969 90 aa5.18□□□□□ -1.58
CD46-216ENST00000490278 LTA4HP09960 611 aaKnown RBP5.18□□□□□ -1.58
CD46-216ENST00000490278 PF4V1P10720 104 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms