RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PIN4Q9Y237 131 aaKnown RBP15.73■□□□□ 0.11
VARS-227ENST00000489979 EDIL3O43854 480 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 B4GALT3O60512 393 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 GAS7O60861 476 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 SKIP12755 728 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 SFPQP23246 707 aaKnown RBP eCLIP15.72■□□□□ 0.11
VARS-227ENST00000489979 KLRC2P26717 231 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 GNA11P29992 359 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 SFNP31947 248 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 RCAN1P53805 252 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 CDC42EP1Q00587 391 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 MTERF2Q49AM1 385 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 RASEFQ8IZ41 740 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 SIX5Q8N196 739 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 DTWD2Q8NBA8 298 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 GJA10Q969M2 543 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 SH2D3AQ9BRG2 576 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 EMILIN2Q9BXX0 1053 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 UNC45AQ9H3U1 944 aa15.72■□□□□ 0.11
VARS-227ENST00000489979 SEPT9Q9UHD8 586 aaPredicted RBP15.72■□□□□ 0.11
VARS-227ENST00000489979 EP300Q09472 2414 aaPredicted RBP15.72■□□□□ 0.11
VARS-227ENST00000489979 IGKV6-21A0A0C4DH24 114 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 CCDC196A0A1B0GTZ2 297 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 TMEM150BA6NC51 233 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 SSBP05455 408 aaKnown RBP eCLIP15.71■□□□□ 0.11
VARS-227ENST00000489979 CNPP09543 421 aaKnown RBP15.71■□□□□ 0.11
VARS-227ENST00000489979 CLCN4P51793 760 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 JAK3P52333 1124 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 LETM2Q2VYF4 491 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 LRCH2Q5VUJ6 765 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 ZNF280BQ86YH2 543 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 SLC5A5Q92911 643 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 CCDC136Q96JN2 1154 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 CEP89Q96ST8 783 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 RIT2Q99578 217 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 TEKT3Q9BXF9 490 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 NIFKQ9BYG3 293 aaKnown RBP15.71■□□□□ 0.11
VARS-227ENST00000489979 WDR87Q6ZQQ6 2873 aa15.71■□□□□ 0.11
VARS-227ENST00000489979 PRPF3O43395 683 aaKnown RBP15.7■□□□□ 0.1
VARS-227ENST00000489979 NARSO43776 548 aaKnown RBP15.7■□□□□ 0.1
VARS-227ENST00000489979 LILRB3O75022 631 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 ZNF623O75123 536 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 DNM2P50570 870 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 RAB27AP51159 221 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 FGD1P98174 961 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 TSGA10IPQ3SY00 556 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 XKR3Q5GH77 459 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 CATSPER4Q7RTX7 472 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 MIER3Q7Z3K6 550 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 ZNF410Q86VK4 478 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 RHPN2Q8IUC4 686 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 KSR1Q8IVT5 923 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 BICD2Q8TD16 824 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 INO80BQ9C086 356 aaPredicted RBP15.7■□□□□ 0.1
VARS-227ENST00000489979 IGSF9Q9P2J2 1179 aa15.7■□□□□ 0.1
VARS-227ENST00000489979 SUCLA2Q9P2R7 463 aaPredicted RBP15.7■□□□□ 0.1
VARS-227ENST00000489979 STK25O00506 426 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 DDHD2O94830 711 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 STBD1O95210 358 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 USP11P51784 963 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 AGMOQ6ZNB7 445 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 C15orf39Q6ZRI6 1047 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 URGCPQ8TCY9 931 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 PHKBQ93100 1093 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 PGBD4Q96DM1 585 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 NLRP4Q96MN2 994 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 MRPL17Q9NRX2 175 aaKnown RBP15.69■□□□□ 0.1
VARS-227ENST00000489979 PCDHB2Q9Y5E7 798 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 ZNF292O60281 2723 aa15.69■□□□□ 0.1
VARS-227ENST00000489979 CACNA1AO00555 2505 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 N4BP1O75113 896 aaKnown RBP15.68■□□□□ 0.1
VARS-227ENST00000489979 PSMD10O75832 226 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 ALDH2P05091 517 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 CFHP08603 1231 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 CPA1P15085 419 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 AFF1P51825 1210 aaKnown RBP15.68■□□□□ 0.1
VARS-227ENST00000489979 AKAP17AQ02040 695 aaKnown RBP15.68■□□□□ 0.1
VARS-227ENST00000489979 KRT32Q14532 448 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 RDM1Q8NG50 284 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 KCNG4Q8TDN1 519 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 RSAD2Q8WXG1 361 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 FAM193BQ96PV7 902 aaPredicted RBP15.68■□□□□ 0.1
VARS-227ENST00000489979 MAN1C1Q9NR34 630 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 VPS54Q9P1Q0 977 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 STK39Q9UEW8 545 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 FAN1Q9Y2M0 1017 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 DNAH14Q0VDD8 3507 aa15.68■□□□□ 0.1
VARS-227ENST00000489979 DOCK8Q8NF50 2099 aa15.67■□□□□ 0.1
VARS-227ENST00000489979 KRBA1A5PL33 1030 aa15.67■□□□□ 0.1
VARS-227ENST00000489979 DDX11L8A8MPP1 907 aa15.67■□□□□ 0.1
VARS-227ENST00000489979 C2CD2LO14523 706 aa15.67■□□□□ 0.1
VARS-227ENST00000489979 NRP1O14786 923 aa15.67■□□□□ 0.1
VARS-227ENST00000489979 MAFO75444 373 aaPredicted RBP15.67■□□□□ 0.1
VARS-227ENST00000489979 GBP2P32456 591 aaPredicted RBP15.67■□□□□ 0.1
VARS-227ENST00000489979 IRX6P78412 446 aaPredicted RBP15.67■□□□□ 0.1
VARS-227ENST00000489979 Q6ZUG5 572 aa15.67■□□□□ 0.1
VARS-227ENST00000489979 CCDC148Q8NFR7 591 aa15.67■□□□□ 0.1
VARS-227ENST00000489979 CMASQ8NFW8 434 aaPredicted RBP15.67■□□□□ 0.1
VARS-227ENST00000489979 TMEM175Q9BSA9 504 aa15.67■□□□□ 0.1
VARS-227ENST00000489979 RSAD1Q9HA92 442 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms