RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 SPTAN1Q13813 2472 aaKnown RBP8.38□□□□□ -1.07
COL9A1-209ENST00000489861 TEX15Q9BXT5 2789 aa8.38□□□□□ -1.07
COL9A1-209ENST00000489861 SMIM35A0A1B0GVV1 85 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 GPR182O15218 404 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 NCAM2O15394 837 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 FIBPO43427 364 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 HYAL3O43820 417 aaPredicted RBP8.37□□□□□ -1.07
COL9A1-209ENST00000489861 ATP9AO75110 1047 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 ZC3H11AO75152 810 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL9A1-209ENST00000489861 PAPLNO95428 1278 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 SPATA31D3P0C874 917 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 PI4KAP42356 2102 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 ADCY1Q08828 1119 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 GAS6Q14393 721 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 GNPTABQ3T906 1256 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 SH3PXD2AQ5TCZ1 1133 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 KIAA1211LQ6NV74 962 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 CYP26C1Q6V0L0 522 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 FAM43BQ6ZT52 329 aaPredicted RBP8.37□□□□□ -1.07
COL9A1-209ENST00000489861 SPATA31D4Q6ZUB0 917 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
COL9A1-209ENST00000489861 ECHDC2Q86YB7 292 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 KIAA0319LQ8IZA0 1049 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 ABCA7Q8IZY2 2146 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 NME8Q8N427 588 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 RNF169Q8NCN4 708 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 GLIS3Q8NEA6 775 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 SEPT1Q8WYJ6 367 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 PPP1R16BQ96T49 567 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 SENP7Q9BQF6 1050 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 EMILIN2Q9BXX0 1053 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 NT5C3AQ9H0P0 336 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 HEBP1Q9NRV9 189 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 ANAPC4Q9UJX5 808 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 KLK13Q9UKR3 277 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 COL4A2P08572 1712 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 PLXNB3Q9ULL4 1909 aa8.37□□□□□ -1.07
COL9A1-209ENST00000489861 FRMPD4Q14CM0 1322 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 MYH9P35579 1960 aaKnown RBP8.36□□□□□ -1.07
COL9A1-209ENST00000489861 EIF4E1BA6NMX2 242 aaKnown RBP8.36□□□□□ -1.07
COL9A1-209ENST00000489861 B4GALT3O60512 393 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 C1QL1O75973 258 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 GALTP07902 379 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 TROAPQ12815 778 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 RRP12Q5JTH9 1297 aaKnown RBP8.36□□□□□ -1.07
COL9A1-209ENST00000489861 PLA2G2CQ5R387 149 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 RNF43Q68DV7 783 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 TCEAL6Q6IPX3 200 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 MTHFD1LQ6UB35 978 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 ZNF852Q6ZMS4 543 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 TCEAL3Q969E4 200 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 OSMRQ99650 979 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 KXD1Q9BQD3 176 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 SMARCAD1Q9H4L7 1026 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 DCTPP1Q9H773 170 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 NRDE2Q9H7Z3 1164 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 TOMM22Q9NS69 142 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 MAP3K20Q9NYL2 800 aaKnown RBP8.36□□□□□ -1.07
COL9A1-209ENST00000489861 NDRG2Q9UN36 371 aaKnown RBP8.36□□□□□ -1.07
COL9A1-209ENST00000489861 MSRB2Q9Y3D2 182 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 NEUROG3Q9Y4Z2 214 aa8.36□□□□□ -1.07
COL9A1-209ENST00000489861 PDCD11Q14690 1871 aaKnown RBP8.36□□□□□ -1.07
COL9A1-209ENST00000489861 COL6A6A6NMZ7 2263 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 K7ESF4 209 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 TEX28O15482 410 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 PCP11498 1178 aaKnown RBP8.35□□□□□ -1.07
COL9A1-209ENST00000489861 PLA2G2AP14555 144 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 KCNA2P16389 499 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 KLRC1P26715 233 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 CNR2P34972 360 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 CCR3P51677 355 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 MFAP1P55081 439 aaKnown RBP8.35□□□□□ -1.07
COL9A1-209ENST00000489861 PFKPQ01813 784 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 KIZQ2M2Z5 673 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 HEATR6Q6AI08 1181 aaKnown RBP8.35□□□□□ -1.07
COL9A1-209ENST00000489861 CEP68Q76N32 757 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 SIRT2Q8IXJ6 389 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 TTC14Q96N46 770 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 AMNQ9BXJ7 453 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 C2orf42Q9NWW7 574 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 DNAJB4Q9UDY4 337 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 CDH7Q9ULB5 785 aa8.35□□□□□ -1.07
COL9A1-209ENST00000489861 GOLGA4Q13439 2230 aaKnown RBP8.34□□□□□ -1.07
COL9A1-209ENST00000489861 C4orf47A7E2U8 309 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 GCOM1H8Y6P7 765 aaPredicted RBP8.34□□□□□ -1.07
COL9A1-209ENST00000489861 C2CD2LO14523 706 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 DHX16O60231 1041 aaKnown RBP8.34□□□□□ -1.07
COL9A1-209ENST00000489861 STAM2O75886 525 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 EPN2O95208 641 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 GLUD1P00367 558 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 POLR2MP0CAP2 368 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 FSHRP23945 695 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 CXCL12P48061 93 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 SLC11A1P49279 550 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 NTHL1P78549 312 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 C19orf57Q0VDD7 668 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 PPP2R5DQ14738 602 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 ODR4Q5SWX8 454 aa8.34□□□□□ -1.07
COL9A1-209ENST00000489861 VPS53Q5VIR6 699 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms