RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 ACSF2Q96CM8 615 aaPredicted RBP11.66□□□□□ -0.54
CHKB-211ENST00000489453 IGSF21Q96ID5 467 aa11.66□□□□□ -0.54
CHKB-211ENST00000489453 FAM193BQ96PV7 902 aaPredicted RBP11.66□□□□□ -0.54
CHKB-211ENST00000489453 EMILIN2Q9BXX0 1053 aa11.66□□□□□ -0.54
CHKB-211ENST00000489453 NIFKQ9BYG3 293 aaKnown RBP11.66□□□□□ -0.54
CHKB-211ENST00000489453 ZBP1Q9H171 429 aa11.66□□□□□ -0.54
CHKB-211ENST00000489453 SLKQ9H2G2 1235 aaPredicted RBP11.66□□□□□ -0.54
CHKB-211ENST00000489453 NCOA5Q9HCD5 579 aaKnown RBP11.66□□□□□ -0.54
CHKB-211ENST00000489453 STK39Q9UEW8 545 aa11.66□□□□□ -0.54
CHKB-211ENST00000489453 PCDHA4Q9UN74 947 aa11.66□□□□□ -0.54
CHKB-211ENST00000489453 MTCL1Q9Y4B5 1905 aaKnown RBP11.66□□□□□ -0.54
CHKB-211ENST00000489453 TMEM150BA6NC51 233 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 H0Y858 1186 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
CHKB-211ENST00000489453 DKC1O60832 514 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHKB-211ENST00000489453 PSMD10O75832 226 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 REC8O95072 547 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 TDP2O95551 362 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 BRD1O95696 1058 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 ASGR2P07307 311 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 EPCAMP16422 314 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 HSPA4P34932 840 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 PSMC5P62195 406 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 NTRK3Q16288 839 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 CPLX2Q6PUV4 134 aaKnown RBP11.65□□□□□ -0.54
CHKB-211ENST00000489453 ZDHHC14Q8IZN3 488 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 BLIDQ8IZY5 108 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 SLC7A3Q8WY07 619 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 KCNB2Q92953 911 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 SH2D3AQ9BRG2 576 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 TRAIPQ9BWF2 469 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 NRDE2Q9H7Z3 1164 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 SFXN1Q9H9B4 322 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 FAM105AQ9NUU6 356 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 TBC1D13Q9NVG8 400 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 LIMD1Q9UGP4 676 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 DDX25Q9UHL0 483 aaKnown RBP11.65□□□□□ -0.54
CHKB-211ENST00000489453 USP34Q70CQ2 3546 aa11.65□□□□□ -0.54
CHKB-211ENST00000489453 MARCH6O60337 910 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 MAFO75444 373 aaPredicted RBP11.64□□□□□ -0.55
CHKB-211ENST00000489453 DEXIO95424 95 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 SSBP05455 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
CHKB-211ENST00000489453 GALTP07902 379 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 KLRC2P26717 231 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 PDIA3P30101 505 aaKnown RBP11.64□□□□□ -0.55
CHKB-211ENST00000489453 NONOQ15233 471 aaKnown RBP eCLIP11.64□□□□□ -0.55
CHKB-211ENST00000489453 PLA2G4FQ68DD2 849 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 ELMSAN1Q6PJG2 1045 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 TMC5Q6UXY8 1006 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 CCDC149Q6ZUS6 474 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 OTOP3Q7RTS5 596 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 TMEM173Q86WV6 379 aaPredicted RBP11.64□□□□□ -0.55
CHKB-211ENST00000489453 EXOC8Q8IYI6 725 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 FBXL16Q8N461 479 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 CYP26B1Q9NR63 512 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 USTQ9Y2C2 406 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 PCDHB2Q9Y5E7 798 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 COL4A3BPQ9Y5P4 624 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 IRAK3Q9Y616 596 aa11.64□□□□□ -0.55
CHKB-211ENST00000489453 CYP3A7-CYP3A51PA0A087WV96 503 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 IGKV6-21A0A0C4DH24 114 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 OFD1O75665 1012 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 RFX1P22670 979 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 CYP3A7P24462 503 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 QARSP47897 775 aaKnown RBP11.63□□□□□ -0.55
CHKB-211ENST00000489453 SLC11A1P49279 550 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 PTPN14Q15678 1187 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 LETM2Q2VYF4 491 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 ASTLQ6HA08 431 aaPredicted RBP11.63□□□□□ -0.55
CHKB-211ENST00000489453 GALNT17Q6IS24 598 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 KANK3Q6NY19 840 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 MOXD1Q6UVY6 613 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 KRT25Q7Z3Z0 450 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 KSR1Q8IVT5 923 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 FLCNQ8NFG4 579 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 SLC22A17Q8WUG5 538 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 PSPC1Q8WXF1 523 aaKnown RBP11.63□□□□□ -0.55
CHKB-211ENST00000489453 CEP170P1Q96L14 293 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 AGXT2Q9BYV1 514 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 SMOC2Q9H3U7 446 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 RSAD1Q9HA92 442 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 MRPL17Q9NRX2 175 aaKnown RBP11.63□□□□□ -0.55
CHKB-211ENST00000489453 AGPAT5Q9NUQ2 364 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 KANSL3Q9P2N6 904 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 DNAJB4Q9UDY4 337 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 FBXL21Q9UKT6 434 aa11.63□□□□□ -0.55
CHKB-211ENST00000489453 PTPRZ1P23471 2315 aaPredicted RBP11.63□□□□□ -0.55
CHKB-211ENST00000489453 CNTNAP2Q9UHC6 1331 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 CCDC194A0A1B0GVG4 234 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 EDIL3O43854 480 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 ZNF623O75123 536 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 ERLIN2O94905 339 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 ALDH2P05091 517 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 URODP06132 367 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 SRGAP2CP0DJJ0 459 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 RFC5P40937 340 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 INF2Q27J81 1249 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 ANO5Q75V66 913 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 RUFY3Q7L099 469 aa11.62□□□□□ -0.55
CHKB-211ENST00000489453 SRGAP1Q7Z6B7 1085 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms