RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 NRDE2Q9H7Z3 1164 aa12.17□□□□□ -0.46
PTP4A2-206ENST00000489313 TBC1D13Q9NVG8 400 aa12.17□□□□□ -0.46
PTP4A2-206ENST00000489313 DNAJB4Q9UDY4 337 aa12.17□□□□□ -0.46
PTP4A2-206ENST00000489313 SEPT9Q9UHD8 586 aaPredicted RBP12.17□□□□□ -0.46
PTP4A2-206ENST00000489313 USTQ9Y2C2 406 aa12.17□□□□□ -0.46
PTP4A2-206ENST00000489313 A0A087WZ62 844 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 B4GALT3O60512 393 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 GALTP07902 379 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 GNA11P29992 359 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 CLCN5P51795 746 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 RCAN1P53805 252 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 POLGP54098 1239 aaPredicted RBP12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 RNASELQ05823 741 aaKnown RBP12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 NOMO2Q5JPE7 1267 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 LRCH2Q5VUJ6 765 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 DDX53Q86TM3 631 aaKnown RBP12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 CABP7Q86V35 215 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 SKAP1Q86WV1 359 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 CCDC136Q96JN2 1154 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 FDXACB1Q9BRP7 624 aaPredicted RBP12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 CYP26B1Q9NR63 512 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 CHST12Q9NRB3 414 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 PIN4Q9Y237 131 aaKnown RBP12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 IRAK3Q9Y616 596 aa12.16□□□□□ -0.46
PTP4A2-206ENST00000489313 CCDC196A0A1B0GTZ2 297 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 PRPF3O43395 683 aaKnown RBP12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 PI15O43692 258 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 SFPQP23246 707 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 SFNP31947 248 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 SLC11A1P49279 550 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 PTPN14Q15678 1187 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 TSGA10IPQ3SY00 556 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 CWF19L1Q69YN2 538 aaKnown RBP12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 GLB1LQ6UWU2 654 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 Q6ZUG5 572 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 KSR1Q8IVT5 923 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 SLC5A5Q92911 643 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 RIT2Q99578 217 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 TEKT3Q9BXF9 490 aa12.15□□□□□ -0.46
PTP4A2-206ENST00000489313 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 OFD1O75665 1012 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 SSBP05455 408 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 JAK3P52333 1124 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 GIT2Q14161 759 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 KRT32Q14532 448 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 CCDC149Q6ZUS6 474 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 GPR149Q86SP6 731 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 ZNF280BQ86YH2 543 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 RHPN2Q8IUC4 686 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 BICD2Q8TD16 824 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 BRF1Q92994 677 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 NKD2Q969F2 451 aaPredicted RBP12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 ACSF2Q96CM8 615 aaPredicted RBP12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 CEP89Q96ST8 783 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 TRAIPQ9BWF2 469 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 NIFKQ9BYG3 293 aaKnown RBP12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 SFXN1Q9H9B4 322 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 FAM105AQ9NUU6 356 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 VPS54Q9P1Q0 977 aa12.14□□□□□ -0.47
PTP4A2-206ENST00000489313 IGKV6-21A0A0C4DH24 114 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 PSMD10O75832 226 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 STBD1O95210 358 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 CNPP09543 421 aaKnown RBP12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 NPR3P17342 541 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 KLRC2P26717 231 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 DNM2P50570 870 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 AFF1P51825 1210 aaKnown RBP12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 AKAP17AQ02040 695 aaKnown RBP12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 TDGQ13569 410 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 XKR3Q5GH77 459 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 OTOP3Q7RTS5 596 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 CATSPER4Q7RTX7 472 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 MIER3Q7Z3K6 550 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 PPFIBP1Q86W92 1011 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 ADSSL1Q8N142 457 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 NLRP4Q96MN2 994 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 SLC26A6Q9BXS9 759 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 SUCLA2Q9P2R7 463 aaPredicted RBP12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 CEP250Q9BV73 2442 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 DDX11L8A8MPP1 907 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 ZNF623O75123 536 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 DDHD2O94830 711 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 HMGB1P09429 215 aaKnown RBP12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 SKIP12755 728 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 AOC1P19801 751 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 USP11P51784 963 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 CLCN4P51793 760 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 CDC42EP1Q00587 391 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 FOXK2Q01167 660 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 NTRK3Q16288 839 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 BMP2KLQ5H9B9 411 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 ZNF410Q86VK4 478 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 SIX5Q8N196 739 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 CCDC148Q8NFR7 591 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 RSPH1Q8WYR4 309 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 KLHL5Q96PQ7 755 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 EMILIN2Q9BXX0 1053 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 KCNK12Q9HB15 430 aa12.13□□□□□ -0.47
PTP4A2-206ENST00000489313 FBXL21Q9UKT6 434 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms