RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 CCDC28BQ9BUN5 200 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 GANQ9H2C0 597 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 DHX36Q9H2U1 1008 aaKnown RBP22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 PFASO15067 1338 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 TNS3Q68CZ2 1445 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 MARK3P27448 753 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 CTSWP56202 376 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 C4orf50Q6ZRC1 276 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 SYNE4Q8N205 404 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 PITPNM3Q9BZ71 974 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 PARP2Q9UGN5 583 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 AMFRQ9UKV5 643 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 RTCBQ9Y3I0 505 aaKnown RBP22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 USH1CQ9Y6N9 552 aa22.87■■□□□ 1.25
NSMCE4A-211ENST00000489266 SLC5A1P13866 664 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 TAC1P20366 129 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 ATP5DP30049 168 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 RPL21P46778 160 aaKnown RBP22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 NPEPPSP55786 919 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 BPIFB4P59827 614 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 DCAF12L1Q5VU92 463 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 LRRC74BQ6ZQY2 392 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 DAGLBQ8NCG7 672 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 STKLD1Q8NE28 680 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 LZICQ8WZA0 190 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 DDX17Q92841 729 aaKnown RBP22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 RUNDC3BQ96NL0 473 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 SERPINB12Q96P63 405 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 NR1H4Q96RI1 486 aaPredicted RBP22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 SLX1AQ9BQ83 275 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 LARSQ9P2J5 1176 aaKnown RBP22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 DIS3Q9Y2L1 958 aaKnown RBP22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 PALM3A6NDB9 673 aaPredicted RBP22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 MAPK13O15264 365 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 OR52Z1P0C646 297 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 IGHMBP2P38935 993 aaKnown RBP22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 RCN1Q15293 331 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 ADAT2Q7Z6V5 191 aaKnown RBP22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 NENFQ9UMX5 172 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 BZW2Q9Y6E2 419 aaKnown RBP22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 ARAP2Q8WZ64 1704 aa22.86■■□□□ 1.25
NSMCE4A-211ENST00000489266 DCCP43146 1447 aa22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 MYMKA6NI61 221 aa22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 PTGIRP43119 386 aa22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 SH3BGRP55822 239 aaPredicted RBP22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 FKBP3Q00688 224 aaKnown RBP22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 ZNF449Q6P9G9 518 aa22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 INTUQ9ULD6 942 aa22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 MROH5Q6ZUA9 1318 aa22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 DDX3YO15523 660 aaKnown RBP22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 LYNP07948 512 aa22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 CCDC166P0CW27 439 aa22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 CD151P48509 253 aa22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 GALNT17Q6IS24 598 aa22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 GPKOWQ92917 476 aaPredicted RBP eCLIP22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 CALML4Q96GE6 196 aa22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 ARMCX3Q9UH62 379 aaPredicted RBP22.85■■□□□ 1.25
NSMCE4A-211ENST00000489266 SPATA31D3P0C874 917 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 BRAFP15056 766 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 SLC34A1Q06495 639 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 TMEM62Q0P6H9 643 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 AP1B1Q10567 949 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 PRPF4BQ13523 1007 aaKnown RBP22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 LIN52Q52LA3 116 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 SPATA31D4Q6ZUB0 917 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 CIDEBQ9UHD4 219 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 STARD13Q9Y3M8 1113 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 DCTN3O75935 186 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 TMCC1O94876 653 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 H2AFZP0C0S5 128 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 UBTFL6P0CB48 400 aaPredicted RBP22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 CYP7A1P22680 504 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 PTPN4P29074 926 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 FOXN2P32314 431 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 Q4G0T1 1027 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 RFWD3Q6PCD5 774 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 H2AFVQ71UI9 128 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 HELBQ8NG08 1087 aaPredicted RBP22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 HIC2Q96JB3 615 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 NT5C3AQ9H0P0 336 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 KIF13BQ9NQT8 1826 aa22.84■■□□□ 1.25
NSMCE4A-211ENST00000489266 CBX6O95503 412 aa22.83■■□□□ 1.25
NSMCE4A-211ENST00000489266 ZNF568Q3ZCX4 644 aa22.83■■□□□ 1.25
NSMCE4A-211ENST00000489266 ZCWPW2Q504Y3 356 aa22.83■■□□□ 1.25
NSMCE4A-211ENST00000489266 ARHGEF18Q6ZSZ5 1173 aa22.83■■□□□ 1.25
NSMCE4A-211ENST00000489266 CEP128Q6ZU80 1094 aa22.83■■□□□ 1.25
NSMCE4A-211ENST00000489266 PPFIBP2Q8ND30 876 aa22.83■■□□□ 1.25
NSMCE4A-211ENST00000489266 METTL14Q9HCE5 456 aaKnown RBP22.83■■□□□ 1.25
NSMCE4A-211ENST00000489266 DDX43Q9NXZ2 648 aaKnown RBP22.83■■□□□ 1.25
NSMCE4A-211ENST00000489266 LRP2BPQ9P2M1 347 aa22.83■■□□□ 1.25
NSMCE4A-211ENST00000489266 PCDHA3Q9Y5H8 950 aa22.83■■□□□ 1.25
NSMCE4A-211ENST00000489266 POTEFA5A3E0 1075 aa22.83■■□□□ 1.24
NSMCE4A-211ENST00000489266 PFDN1O60925 122 aa22.83■■□□□ 1.24
NSMCE4A-211ENST00000489266 POTEIP0CG38 1075 aa22.83■■□□□ 1.24
NSMCE4A-211ENST00000489266 POTEJP0CG39 1038 aa22.83■■□□□ 1.24
NSMCE4A-211ENST00000489266 STRN3Q13033 797 aa22.83■■□□□ 1.24
NSMCE4A-211ENST00000489266 PABPC4Q13310 644 aaKnown RBP eCLIP22.83■■□□□ 1.242e-7■■■■■ 32.3
NSMCE4A-211ENST00000489266 POTEEQ6S8J3 1075 aa22.83■■□□□ 1.24
NSMCE4A-211ENST00000489266 FAM47EQ6ZV65 393 aa22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms