RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 PDE12Q6L8Q7 609 aaKnown RBP14□□□□□ -0.17
SRRM1-216ENST00000489130 KCNT2Q6UVM3 1135 aa14□□□□□ -0.17
SRRM1-216ENST00000489130 EFHBQ8N7U6 833 aa14□□□□□ -0.17
SRRM1-216ENST00000489130 RNF149Q8NC42 400 aa14□□□□□ -0.17
SRRM1-216ENST00000489130 HELQQ8TDG4 1101 aa14□□□□□ -0.17
SRRM1-216ENST00000489130 MRPS27Q92552 414 aaKnown RBP14□□□□□ -0.17
SRRM1-216ENST00000489130 ZNF558Q96NG5 402 aa14□□□□□ -0.17
SRRM1-216ENST00000489130 IGFLR1Q9H665 355 aa14□□□□□ -0.17
SRRM1-216ENST00000489130 MINDY3Q9H8M7 445 aa14□□□□□ -0.17
SRRM1-216ENST00000489130 CD320Q9NPF0 282 aa14□□□□□ -0.17
SRRM1-216ENST00000489130 PCDHGC5Q9Y5F6 944 aa14□□□□□ -0.17
SRRM1-216ENST00000489130 BDP1A6H8Y1 2624 aa14□□□□□ -0.17
SRRM1-216ENST00000489130 NCOR1O75376 2440 aa14□□□□□ -0.17
SRRM1-216ENST00000489130 SPATA31C1P0DKV0 1188 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 ATP2B1P20020 1258 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 HOXA11P31270 313 aaPredicted RBP13.99□□□□□ -0.17
SRRM1-216ENST00000489130 PBX3P40426 434 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 NRIP1P48552 1158 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 ERVFC1P60507 584 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 POU5F1BQ06416 359 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 SMAD4Q13485 552 aaKnown RBP13.99□□□□□ -0.17
SRRM1-216ENST00000489130 MXD4Q14582 209 aaPredicted RBP13.99□□□□□ -0.17
SRRM1-216ENST00000489130 RABEP1Q15276 862 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 PCBP1Q15365 356 aaKnown RBP eCLIP13.99□□□□□ -0.17
SRRM1-216ENST00000489130 SMAD2Q15796 467 aaKnown RBP13.99□□□□□ -0.17
SRRM1-216ENST00000489130 NOSTRINQ8IVI9 506 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 GJD3Q8N144 294 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 FAM184AQ8NB25 1140 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 MSLNLQ96KJ4 702 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 PRKAG3Q9UGI9 489 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 PUF60Q9UHX1 559 aaKnown RBP13.99□□□□□ -0.17
SRRM1-216ENST00000489130 MYO7AQ13402 2215 aa13.99□□□□□ -0.17
SRRM1-216ENST00000489130 FSD2A1L4K1 749 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 GLP2RO95838 553 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 OR52Z1P0C646 297 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 XRCC6P12956 609 aaKnown RBP eCLIP13.98□□□□□ -0.17
SRRM1-216ENST00000489130 ARL2P36404 184 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 TRAPPC10P48553 1259 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 NDUFV1P49821 464 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 PTENP60484 403 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 GLB1LQ6UWU2 654 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 RBM23Q86U06 439 aaKnown RBP13.98□□□□□ -0.17
SRRM1-216ENST00000489130 CATSPER3Q86XQ3 398 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 IFNLR1Q8IU57 520 aaPredicted RBP13.98□□□□□ -0.17
SRRM1-216ENST00000489130 SLC39A11Q8N1S5 342 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 MICAL1Q8TDZ2 1067 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 PIGOQ8TEQ8 1089 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 LPPQ93052 612 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 CCDC43Q96MW1 224 aaKnown RBP13.98□□□□□ -0.17
SRRM1-216ENST00000489130 CDCA3Q99618 268 aaPredicted RBP13.98□□□□□ -0.17
SRRM1-216ENST00000489130 C1QTNF1Q9BXJ1 281 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 TLE6Q9H808 572 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 TUFT1Q9NNX1 390 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 SPG21Q9NZD8 308 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 CLEC1BQ9P126 229 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 PCDHB2Q9Y5E7 798 aa13.98□□□□□ -0.17
SRRM1-216ENST00000489130 MEIS3P2A8K0S8 358 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 MBTPS2O43462 519 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 OFD1O75665 1012 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 EYA4O95677 639 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 U2AF2P26368 475 aaKnown RBP eCLIP13.97□□□□□ -0.17
SRRM1-216ENST00000489130 TECP42680 631 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 BCAR1P56945 870 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 KRT17Q04695 432 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 ZP2Q05996 745 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 COASYQ13057 564 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 GNL2Q13823 731 aaKnown RBP13.97□□□□□ -0.17
SRRM1-216ENST00000489130 ZNF174Q15697 407 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 CLUL1Q15846 466 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 DUSP6Q16828 381 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 TTC38Q5R3I4 469 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 UBXN11Q5T124 520 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 MRPL10Q7Z7H8 261 aaKnown RBP13.97□□□□□ -0.17
SRRM1-216ENST00000489130 SMRP1Q8NCR6 262 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 ASAP3Q8TDY4 903 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 KHSRPQ92945 711 aaKnown RBP eCLIP13.97□□□□□ -0.17
SRRM1-216ENST00000489130 PGBD4Q96DM1 585 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 TCF25Q9BQ70 676 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 POLR3CQ9BUI4 534 aaPredicted RBP13.97□□□□□ -0.17
SRRM1-216ENST00000489130 NFKBIZQ9BYH8 718 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 NGRNQ9NPE2 291 aaKnown RBP13.97□□□□□ -0.17
SRRM1-216ENST00000489130 TBC1D13Q9NVG8 400 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 CD207Q9UJ71 328 aa13.97□□□□□ -0.17
SRRM1-216ENST00000489130 CARNS1A5YM72 827 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 PER2O15055 1255 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 ST18O60284 1047 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 TSPAN1O60635 241 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 MED24O75448 989 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 ERLIN2O94905 339 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 GLRA2P23416 452 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 AXLP30530 894 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 ALDH7A1P49419 539 aaKnown RBP13.96□□□□□ -0.17
SRRM1-216ENST00000489130 CAPSQ13938 189 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 KCNC3Q14003 757 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 TFDP1Q14186 410 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 LONRF3Q496Y0 759 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 NOMO2Q5JPE7 1267 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 PLPP4Q5VZY2 271 aa13.96□□□□□ -0.17
SRRM1-216ENST00000489130 AGMOQ6ZNB7 445 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms