RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 PVALEFA0A1B0GWK0 134 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 RBM47A0AV96 593 aaKnown RBP8.27□□□□□ -1.09
BEST3-205ENST00000488961 AHCYL1O43865 530 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 TACC1O75410 805 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 FESP07332 822 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 GLI1P08151 1106 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 NEFHP12036 1026 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 USP14P54578 494 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 GUCY2DQ02846 1103 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 SPP2Q13103 211 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 ASIC2Q16515 512 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 KLHDC7AQ5VTJ3 777 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 SCARA3Q6AZY7 606 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 TATDN1Q6P1N9 297 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 POTEAQ6S8J7 498 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 EEPD1Q7L9B9 569 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 ARHGAP22Q7Z5H3 698 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 FAM81AQ8TBF8 368 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 SELENOOQ9BVL4 669 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 MMADHCQ9H3L0 296 aaPredicted RBP8.27□□□□□ -1.09
BEST3-205ENST00000488961 CUEDC2Q9H467 287 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 BATF3Q9NR55 127 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 PAPOLBQ9NRJ5 636 aaKnown RBP8.27□□□□□ -1.09
BEST3-205ENST00000488961 TOPORSQ9NS56 1045 aaPredicted RBP8.27□□□□□ -1.09
BEST3-205ENST00000488961 TMOD2Q9NZR1 351 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 VAV3Q9UKW4 847 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 FLOT1O75955 427 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 KRT14P02533 472 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 XRCC5P13010 732 aaKnown RBP8.27□□□□□ -1.09
BEST3-205ENST00000488961 UCHL3P15374 230 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 ITGB5P18084 799 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 PON1P27169 355 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 SLC8A1P32418 973 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 GCLMP48507 274 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 NOVP48745 357 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 HDLBPQ00341 1268 aaKnown RBP8.27□□□□□ -1.09
BEST3-205ENST00000488961 SLC15A2Q16348 729 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 EXOC3L4Q17RC7 722 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 SLC9C1Q4G0N8 1177 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 TRIM59Q8IWR1 403 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 TRIM42Q8IWZ5 723 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 RBM12BQ8IXT5 1001 aaKnown RBP8.27□□□□□ -1.09
BEST3-205ENST00000488961 SPATA4Q8NEY3 305 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 PPP1R13LQ8WUF5 828 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 SLC20A1Q8WUM9 679 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 CBWD1Q9BRT8 395 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 NYAP2Q9P242 653 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 MYO1AQ9UBC5 1043 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 BAIAP2L1Q9UHR4 511 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 SNX12Q9UMY4 172 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 RIPK3Q9Y572 518 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 IGSF9BQ9UPX0 1349 aa8.27□□□□□ -1.09
BEST3-205ENST00000488961 IGLV3-22A0A075B6J6 115 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 WNT10BO00744 389 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 TGFB1I1O43294 461 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 CEP104O60308 925 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 RNF8O76064 485 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 HARSP12081 509 aaKnown RBP8.26□□□□□ -1.09
BEST3-205ENST00000488961 FECHP22830 423 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 SEC24CP53992 1094 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 LRRC63Q05C16 580 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 MTMR2Q13614 643 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 RASA3Q14644 834 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 WHAMMP3Q1A5X7 153 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 KNOP1Q1ED39 458 aaKnown RBP8.26□□□□□ -1.09
BEST3-205ENST00000488961 MICALCLQ6ZW33 695 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 CYFIP1Q7L576 1253 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 MFN1Q8IWA4 741 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 TRIM58Q8NG06 486 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 DCAF4Q8WV16 495 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 BICD1Q96G01 975 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 CCDC17Q96LX7 622 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 TAAR1Q96RJ0 339 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 FAM118BQ9BPY3 351 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 FAM167BQ9BTA0 163 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 DDX47Q9H0S4 455 aaKnown RBP8.26□□□□□ -1.09
BEST3-205ENST00000488961 DPH5Q9H2P9 285 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 EPB41L5Q9HCM4 733 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 NR2E1Q9Y466 385 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 GOLGA6BA6NDN3 693 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 SMIM23A6NLE4 172 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 GCOM1H8Y6P7 765 aaPredicted RBP8.26□□□□□ -1.09
BEST3-205ENST00000488961 K7ENM7 598 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 IPO5O00410 1097 aaKnown RBP8.26□□□□□ -1.09
BEST3-205ENST00000488961 SLC16A4O15374 487 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 MAP3K13O43283 966 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 HIP1RO75146 1068 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 ATP6V1G1O75348 118 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 POLR2MP0CAP2 368 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 CXCL9Q07325 125 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 IQCEQ6IPM2 695 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 OTOP1Q7RTM1 612 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 CCDC50Q8IVM0 306 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 FAM178BQ8IXR5 827 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 ZNF473Q8WTR7 871 aaKnown RBP8.26□□□□□ -1.09
BEST3-205ENST00000488961 TCP11Q8WWU5 503 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 ZNF570Q96NI8 536 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 SH3GL2Q99962 352 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 PI4K2AQ9BTU6 479 aa8.26□□□□□ -1.09
BEST3-205ENST00000488961 TRIM4Q9C037 500 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms