RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 LZTS1Q9Y250 596 aa15.38■□□□□ 0.05
SPTLC1-207ENST00000488921 NCOR1O75376 2440 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 H3BQ06 376 aaPredicted RBP15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 ZBTB39O15060 712 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 ERLIN2O94905 339 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 ATF7P17544 494 aaPredicted RBP15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 DNAJB1P25685 340 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 MCM2P49736 904 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 RARRES1P49788 294 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 PLCB3Q01970 1234 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 CTC1Q2NKJ3 1217 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 HAUS3Q68CZ6 603 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 KCNT2Q6UVM3 1135 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 GLB1LQ6UWU2 654 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 HELQQ8TDG4 1101 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 PGBD4Q96DM1 585 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 HCSTQ9UBK5 93 aa15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 PUF60Q9UHX1 559 aaKnown RBP15.37■□□□□ 0.05
SPTLC1-207ENST00000488921 GRXCR2A6NFK2 248 aa15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 ZNF623O75123 536 aa15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 MUTP22033 750 aa15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 U2AF2P26368 475 aaKnown RBP eCLIP15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 TECP42680 631 aa15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 KRT17Q04695 432 aa15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 POU5F1BQ06416 359 aa15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 NCBP1Q09161 790 aaKnown RBP15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 ZNF174Q15697 407 aa15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 MICAL1Q8TDZ2 1067 aa15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 MRPS27Q92552 414 aaKnown RBP15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 POLR3CQ9BUI4 534 aaPredicted RBP15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 IGFLR1Q9H665 355 aa15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 XPNPEP1Q9NQW7 623 aa15.36■□□□□ 0.05
SPTLC1-207ENST00000488921 TDRD15B5MCY1 1934 aaKnown RBP15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 RPA1P27694 616 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 AXLP30530 894 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 IRS1P35568 1242 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 NDUFV1P49821 464 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 PTENP60484 403 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 LRRC55Q6ZSA7 311 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 IFNLR1Q8IU57 520 aaPredicted RBP15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 EFHBQ8N7U6 833 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 CNNM3Q8NE01 707 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 MCPH1Q8NEM0 835 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 PIGOQ8TEQ8 1089 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 CCDC51Q96ER9 411 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 NACC1Q96RE7 527 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 CDCA3Q99618 268 aaPredicted RBP15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 NFKBIZQ9BYH8 718 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 RAB34Q9BZG1 259 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 MINDY3Q9H8M7 445 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 ENTPD7Q9NQZ7 604 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 SPG21Q9NZD8 308 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 DBR1Q9UK59 544 aaKnown RBP15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 STK24Q9Y6E0 443 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 CNTNAP2Q9UHC6 1331 aa15.35■□□□□ 0.05
SPTLC1-207ENST00000488921 LAD1O00515 517 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 USO1O60763 962 aaKnown RBP15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 TBX10O75333 385 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 SPATA31C1P0DKV0 1188 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 SRGAP2BP0DMP2 458 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 IL9P15248 144 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 ARL2P36404 184 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 LTBRP36941 435 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 NRIP1P48552 1158 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 ALDH7A1P49419 539 aaKnown RBP15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 ADAM15Q13444 863 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 CAPSQ13938 189 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 BMS1Q14692 1282 aaKnown RBP15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 NOMO2Q5JPE7 1267 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 NOTUMQ6P988 496 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 ADGRD2Q7Z7M1 963 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 CATSPER3Q86XQ3 398 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 FAM178BQ8IXR5 827 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 URGCPQ8TCY9 931 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 TMX3Q96JJ7 454 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 TLE6Q9H808 572 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 NGRNQ9NPE2 291 aaKnown RBP15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 PRKAG3Q9UGI9 489 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 PCDHB2Q9Y5E7 798 aa15.34■□□□□ 0.05
SPTLC1-207ENST00000488921 INO80B-WBP1J3KQ70 363 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 FSCN2O14926 492 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 ZC3H11AO75152 810 aaKnown RBP eCLIP15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 MED24O75448 989 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 GTF2F1P35269 517 aaKnown RBP eCLIP15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 BCAR1P56945 870 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 RNASELQ05823 741 aaKnown RBP15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 SMAD4Q13485 552 aaKnown RBP15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 POTEGQ6S5H5 508 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 SLC39A11Q8N1S5 342 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 LPPQ93052 612 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 TMEM169Q96HH4 297 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 TBC1D32Q96NH3 1257 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 TCF25Q9BQ70 676 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 POLR3FQ9H1D9 316 aaPredicted RBP15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 RSAD1Q9HA92 442 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 UBN1Q9NPG3 1134 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 CD207Q9UJ71 328 aa15.33■□□□□ 0.04
SPTLC1-207ENST00000488921 INPP5FQ9Y2H2 1132 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms