RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PES1O00541 588 aaKnown RBP13.95□□□□□ -0.18
NELFE-209ENST00000488426 LGR5O75473 907 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 TXNP10599 105 aaKnown RBP13.95□□□□□ -0.18
NELFE-209ENST00000488426 ATP4AP20648 1035 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 TCF7P36402 384 aaPredicted RBP13.95□□□□□ -0.18
NELFE-209ENST00000488426 KCNJ6P48051 423 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 GJA9P57773 515 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 TNFAIP2Q03169 654 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 PTPN21Q16825 1174 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 CCDC40Q4G0X9 1142 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 VWA3BQ502W6 1294 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 ZC2HC1CQ53FD0 456 aaPredicted RBP13.95□□□□□ -0.18
NELFE-209ENST00000488426 FKBP15Q5T1M5 1219 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 FAM102BQ5T8I3 360 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 MAEAQ7L5Y9 396 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 HS2ST1Q7LGA3 356 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 HVCN1Q96D96 273 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 PCYT2Q99447 389 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 GPR20Q99678 358 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 SH2D3AQ9BRG2 576 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 AZI2Q9H6S1 392 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 TMEM206Q9H813 350 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 ATP6V0A4Q9HBG4 840 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 NRBP2Q9NSY0 501 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 EMSYQ7Z589 1322 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 AKR1B15C9JRZ8 316 aaPredicted RBP13.95□□□□□ -0.18
NELFE-209ENST00000488426 NOP56O00567 594 aaKnown RBP13.95□□□□□ -0.18
NELFE-209ENST00000488426 SLC16A3O15427 465 aaKnown RBP13.95□□□□□ -0.18
NELFE-209ENST00000488426 TGFB1I1O43294 461 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 NR3C1P04150 777 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 ASGR1P07306 291 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 BMP8BP34820 402 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 STAT5BP51692 787 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 NCKAP1LP55160 1127 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 TBC1D8BQ0IIM8 1120 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 GNASQ5JWF2 1037 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 TRMT1LQ7Z2T5 733 aaKnown RBP13.95□□□□□ -0.18
NELFE-209ENST00000488426 CNGA4Q8IV77 575 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 TC2NQ8N9U0 490 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 SPIRE2Q8WWL2 714 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 IQCDQ96DY2 449 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 ERGIC2Q96RQ1 377 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 GBP3Q9H0R5 595 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 UPF3AQ9H1J1 476 aaKnown RBP13.95□□□□□ -0.18
NELFE-209ENST00000488426 TMX1Q9H3N1 280 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 NDST4Q9H3R1 872 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 PRDM5Q9NQX1 630 aaPredicted RBP13.95□□□□□ -0.18
NELFE-209ENST00000488426 CGNQ9P2M7 1197 aaKnown RBP13.95□□□□□ -0.18
NELFE-209ENST00000488426 KCNG1Q9UIX4 513 aa13.95□□□□□ -0.18
NELFE-209ENST00000488426 DYNC1LI2O43237 492 aaPredicted RBP13.94□□□□□ -0.18
NELFE-209ENST00000488426 ABCD1P33897 745 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 RFC5P40937 340 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 SLC26A2P50443 739 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 SMTNP53814 917 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 GTF2BQ00403 316 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 PPP2R3AQ06190 1150 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 KCNA1Q09470 495 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 DMP1Q13316 513 aaPredicted RBP13.94□□□□□ -0.18
NELFE-209ENST00000488426 MYBPC2Q14324 1141 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 HSP90AA2PQ14568 343 aaPredicted RBP13.94□□□□□ -0.18
NELFE-209ENST00000488426 MTERF2Q49AM1 385 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 PLPPR4Q7Z2D5 763 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 FRMD5Q7Z6J6 570 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 TRIM59Q8IWR1 403 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 RETREG2Q8NC44 543 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 TMEM174Q8WUU8 243 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 CCDC51Q96ER9 411 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 SPATA33Q96N06 139 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 ACCSQ96QU6 501 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 PANX2Q96RD6 677 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 NTPCRQ9BSD7 190 aaKnown RBP13.94□□□□□ -0.18
NELFE-209ENST00000488426 GPRC5CQ9NQ84 441 aa13.94□□□□□ -0.18
NELFE-209ENST00000488426 RBAK-RBAKDNI3L0D1 243 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 PQBP1O60828 265 aaKnown RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 MFAP3LO75121 409 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 GYPCP04921 128 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 SCP2P22307 547 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 POLGP54098 1239 aaPredicted RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 PEX3P56589 373 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 SNRPFP62306 86 aaKnown RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 RBL2Q08999 1139 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 LAMC2Q13753 1193 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 HSDL1Q3SXM5 330 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 HAUS6Q7Z4H7 955 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 COPS5Q92905 334 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 EMID1Q96A84 441 aaPredicted RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 TSEN34Q9BSV6 310 aaKnown RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 MKNK1Q9BUB5 465 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 NUP58Q9BVL2 599 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 UBE2OQ9C0C9 1292 aaKnown RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 DHX33Q9H6R0 707 aaKnown RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 METTL14Q9HCE5 456 aaKnown RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 XPNPEP1Q9NQW7 623 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 SPTLC3Q9NUV7 552 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 H0YCG3 227 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 GH1P01241 217 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 EPB41P11171 864 aaKnown RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 CST5P28325 142 aaPredicted RBP13.93□□□□□ -0.18
NELFE-209ENST00000488426 ARHGAP1Q07960 439 aa13.93□□□□□ -0.18
NELFE-209ENST00000488426 FAAP100Q0VG06 881 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms