RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 ZNF689Q96CS4 500 aaPredicted RBP17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 PRDM12Q9H4Q4 367 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 CERS4Q9HA82 394 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 POLD4Q9HCU8 107 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 CHST12Q9NRB3 414 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 BLOC1S4Q9NUP1 217 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 SPTBN5Q9NRC6 3674 aaKnown RBP17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 TRANK1O15050 2925 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 MYO9BQ13459 2157 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 EPOPA6NHQ4 379 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 INO80B-WBP1J3KQ70 363 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 SPTLC2O15270 562 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 TSPAN1O60635 241 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 PPP6R2O75170 966 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 SSBP05455 408 aaKnown RBP eCLIP17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 ATF7P17544 494 aaPredicted RBP17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 GUCY2CP25092 1073 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 DNM1Q05193 864 aaKnown RBP17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 MAPK7Q13164 816 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 AMHR2Q16671 573 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 ECHDC2Q86YB7 292 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 RASSF8Q8NHQ8 419 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 KIFAP3Q92845 792 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 TRAIPQ9BWF2 469 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 ELAC1Q9H777 363 aaKnown RBP17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 RNF19AQ9NV58 838 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 TMEM161AQ9NX61 479 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 DACT1Q9NYF0 836 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 DAXXQ9UER7 740 aaPredicted RBP17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 LRFN2Q9ULH4 789 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 PCDHB7Q9Y5E2 793 aa17.72■□□□□ 0.43
ERGIC3-216ENST00000488384 RALGAPA2Q2PPJ7 1873 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 FNDC1Q4ZHG4 1894 aaPredicted RBP17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 NLRC5Q86WI3 1866 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 REV3LO60673 3130 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 KIAA1671Q9BY89 1806 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 A0A0U1RQF3 1178 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 HIP1RO75146 1068 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 ERLIN2O94905 339 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 LINC00271P0C7V0 271 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 FOSL2P15408 326 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 HOXA11P31270 313 aaPredicted RBP17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 NAMPTP43490 491 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 ERVK-21P61565 698 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 PCBP1Q15365 356 aaKnown RBP eCLIP17.71■□□□□ 0.432e-13■■■□□ 15.4
ERGIC3-216ENST00000488384 TWF2Q6IBS0 349 aaKnown RBP17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 ZNF598Q86UK7 904 aaKnown RBP17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 CMTR2Q8IYT2 770 aaKnown RBP17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 ARNTL2Q8WYA1 636 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 RAD54LQ92698 747 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 TGS1Q96RS0 853 aaKnown RBP17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 KIFC3Q9BVG8 833 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 MTUS1Q9ULD2 1270 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 VCANP13611 3396 aa17.71■□□□□ 0.43
ERGIC3-216ENST00000488384 B4GALT5O43286 388 aa17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 FGFR1P11362 822 aa17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 BTG3Q14201 252 aaPredicted RBP17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 PPP2R5AQ15172 486 aa17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 PAN2Q504Q3 1202 aaKnown RBP17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 ATL3Q6DD88 541 aa17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 ZBTB8OSQ8IWT0 167 aa17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 DEPTORQ8TB45 409 aa17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 CHAMP1Q96JM3 812 aa17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 C17orf80Q9BSJ5 609 aa17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 TIPINQ9BVW5 301 aa17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 CCDC113Q9H0I3 377 aa17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 RNF216Q9NWF9 866 aaPredicted RBP17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 KCND2Q9NZV8 630 aa17.7■□□□□ 0.42
ERGIC3-216ENST00000488384 A0A087X0B3 334 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 DDIT3P35638 169 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 TXLNAP40222 546 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 RAD51AP2Q09MP3 1159 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 ADGRE1Q14246 886 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 MCM6Q14566 821 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 NAALADL2Q58DX5 795 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 ARSHQ5FYA8 562 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 UBXN11Q5T124 520 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 GPBP1Q86WP2 473 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 FIBCD1Q8N539 461 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 LARP4BQ92615 738 aaKnown RBP17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 CPB2Q96IY4 423 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 IFT74Q96LB3 600 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 DRC1Q96MC2 740 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 COL25A1Q9BXS0 654 aaPredicted RBP17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 C2orf40Q9H1Z8 148 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 FAM105AQ9NUU6 356 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 STK17AQ9UEE5 414 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 MRPL42Q9Y6G3 142 aaKnown RBP17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 CNTNAP2Q9UHC6 1331 aa17.69■□□□□ 0.42
ERGIC3-216ENST00000488384 NPHP3-ACAD11A0A0J9YXS1 232 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 RFXAPO00287 272 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 EDN1P05305 212 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 ARF4P18085 180 aaPredicted RBP17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 AXLP30530 894 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 RAB27AP51159 221 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 DMP1Q13316 513 aaPredicted RBP17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 FAM187BQ17R55 369 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 CLLU1OSQ5K130 101 aa17.68■□□□□ 0.42
ERGIC3-216ENST00000488384 AXDND1Q5T1B0 1012 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms