RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 NLRP4Q96MN2 994 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 APOL5Q9BWW9 433 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 FAM105AQ9NUU6 356 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 CARNS1A5YM72 827 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 TMEM221A6NGB7 291 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 M0R296 226 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 ASAP2O43150 1006 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 DTNBO60941 627 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 CLASP2O75122 1294 aaKnown RBP17.14■□□□□ 0.33
TRIM50-203ENST00000488217 BAG4O95429 457 aaKnown RBP17.14■□□□□ 0.33
TRIM50-203ENST00000488217 GALTP07902 379 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 RAB27AP51159 221 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 TPRNQ4KMQ1 711 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 NOMO2Q5JPE7 1267 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 SRGAP1Q7Z6B7 1085 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 DDX53Q86TM3 631 aaKnown RBP17.14■□□□□ 0.33
TRIM50-203ENST00000488217 C4orf19Q8IY42 314 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 VPS52Q8N1B4 723 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 TMEM87AQ8NBN3 555 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 WASF1Q92558 559 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 TMEM143Q96AN5 459 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 ADAM7Q9H2U9 754 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 DHX33Q9H6R0 707 aaKnown RBP17.14■□□□□ 0.33
TRIM50-203ENST00000488217 RGL1Q9NZL6 768 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 WRAP73Q9P2S5 460 aaPredicted RBP17.14■□□□□ 0.33
TRIM50-203ENST00000488217 PCDHB2Q9Y5E7 798 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 COL4A3BPQ9Y5P4 624 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 HCFC2Q9Y5Z7 792 aa17.14■□□□□ 0.33
TRIM50-203ENST00000488217 SLITRK3O94933 977 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 CTDNEP1O95476 244 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 ALDH2P05091 517 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 YWHABP31946 246 aaKnown RBP17.13■□□□□ 0.33
TRIM50-203ENST00000488217 RFC5P40937 340 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 POLGP54098 1239 aaPredicted RBP17.13■□□□□ 0.33
TRIM50-203ENST00000488217 LAMTOR4Q0VGL1 99 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 ANKRD1Q15327 319 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 CES5AQ6NT32 575 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 MRPL10Q7Z7H8 261 aaKnown RBP17.13■□□□□ 0.33
TRIM50-203ENST00000488217 ALYREFQ86V81 257 aaKnown RBP17.13■□□□□ 0.33
TRIM50-203ENST00000488217 SLFN12Q8IYM2 578 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 IGSF21Q96ID5 467 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 ZSWIM4Q9H7M6 989 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 NRDE2Q9H7Z3 1164 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 TBC1D13Q9NVG8 400 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 ORC3Q9UBD5 711 aaPredicted RBP17.13■□□□□ 0.33
TRIM50-203ENST00000488217 STK36Q9NRP7 1315 aa17.13■□□□□ 0.33
TRIM50-203ENST00000488217 MEIS3P2A8K0S8 358 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 ZBTB39O15060 712 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 ZC3H11AO75152 810 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRIM50-203ENST00000488217 FDPSP14324 419 aaKnown RBP17.12■□□□□ 0.33
TRIM50-203ENST00000488217 HOXA11P31270 313 aaPredicted RBP17.12■□□□□ 0.33
TRIM50-203ENST00000488217 ANAPC15P60006 121 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 RNASELQ05823 741 aaKnown RBP17.12■□□□□ 0.33
TRIM50-203ENST00000488217 ITIH3Q06033 890 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 GIT2Q14161 759 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 XKR9Q5GH70 373 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 EARS2Q5JPH6 523 aaKnown RBP17.12■□□□□ 0.33
TRIM50-203ENST00000488217 TPH2Q8IWU9 490 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 TCP11Q8WWU5 503 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 PSPC1Q8WXF1 523 aaKnown RBP17.12■□□□□ 0.33
TRIM50-203ENST00000488217 AGPAT5Q9NUQ2 364 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 KANSL3Q9P2N6 904 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 INPP5FQ9Y2H2 1132 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 IRAK3Q9Y616 596 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 EVPLQ92817 2033 aa17.12■□□□□ 0.33
TRIM50-203ENST00000488217 CTSAP10619 480 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 CA8P35219 290 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 AK2P54819 239 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 CTTNQ14247 550 aaKnown RBP17.11■□□□□ 0.33
TRIM50-203ENST00000488217 NCAPH2Q6IBW4 605 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 TMEM173Q86WV6 379 aaPredicted RBP17.11■□□□□ 0.33
TRIM50-203ENST00000488217 ZNF280BQ86YH2 543 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 DYDC2Q96IM9 177 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 NECTIN4Q96NY8 510 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 LXNQ9BS40 222 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 ZBP1Q9H171 429 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 MINDY3Q9H8M7 445 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 PCDHA12Q9UN75 941 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 WDFY4Q6ZS81 3184 aa17.11■□□□□ 0.33
TRIM50-203ENST00000488217 GAS2O43903 313 aaKnown RBP17.1■□□□□ 0.33
TRIM50-203ENST00000488217 KRT2P35908 639 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 NHLH1Q02575 133 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 SPIRE1Q08AE8 756 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 SIGLEC14Q08ET2 396 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 NR5A1Q13285 461 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 ATAT1Q5SQI0 421 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 AGMOQ6ZNB7 445 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 FERMT3Q86UX7 667 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 POTEDQ86YR6 584 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 NECAB1Q8N987 351 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 RNF149Q8NC42 400 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 URGCPQ8TCY9 931 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 AUTS2Q8WXX7 1259 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 HSD17B14Q9BPX1 270 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 GBP3Q9H0R5 595 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 DNAJB4Q9UDY4 337 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 NR2E1Q9Y466 385 aa17.1■□□□□ 0.33
TRIM50-203ENST00000488217 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.09■□□□□ 0.33
TRIM50-203ENST00000488217 DDHD2O94830 711 aa17.09■□□□□ 0.33
TRIM50-203ENST00000488217 MTHFRP42898 656 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms