RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 USP40Q9NVE5 1235 aa15.31■□□□□ 0.04
COL16A1-214ENST00000488128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.3■□□□□ 0.04
COL16A1-214ENST00000488128 BTNL10A8MVZ5 291 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 NUDT17P0C025 328 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 MSH2P43246 934 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 VPS41P49754 854 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 PDE6CP51160 858 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 COPS2P61201 443 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 SARNPP82979 210 aaKnown RBP15.3■□□□□ 0.04
COL16A1-214ENST00000488128 PLS1Q14651 629 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 CRELD2Q6UXH1 353 aaPredicted RBP15.3■□□□□ 0.04
COL16A1-214ENST00000488128 CCDC105Q8IYK2 499 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 ARHGEF2Q92974 986 aaKnown RBP15.3■□□□□ 0.04
COL16A1-214ENST00000488128 BTBD6Q96KE9 485 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 TMEM237Q96Q45 408 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 LRRC27Q9C0I9 530 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 ADAM22Q9P0K1 906 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 NKX1-2Q9UD57 310 aaPredicted RBP15.3■□□□□ 0.04
COL16A1-214ENST00000488128 BZW2Q9Y6E2 419 aaKnown RBP15.3■□□□□ 0.04
COL16A1-214ENST00000488128 MPHOSPH10O00566 681 aaKnown RBP15.3■□□□□ 0.04
COL16A1-214ENST00000488128 PPP1R11O60927 126 aaPredicted RBP15.3■□□□□ 0.04
COL16A1-214ENST00000488128 GCNT3O95395 438 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 GSTA1P08263 222 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 POLD1P28340 1107 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 DRAP1Q14919 205 aaPredicted RBP15.3■□□□□ 0.04
COL16A1-214ENST00000488128 REEP2Q9BRK0 252 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 SLC5A4Q9NY91 659 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 UBAP1LF5GYI3 381 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 RIPK2O43353 540 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 AP1G2O75843 785 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 TRIM49P0CI25 452 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 TRIM49CP0CI26 452 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 GRIK3Q13003 919 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 SNX1Q13596 522 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 MPP2Q14168 576 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 TAF11Q15544 211 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 MFSD14BQ5SR56 506 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 C6orf118Q5T5N4 469 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 CCDC137Q6PK04 289 aaKnown RBP15.3■□□□□ 0.04
COL16A1-214ENST00000488128 PRELID2Q8N945 189 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 SLC35C1Q96A29 364 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 SAAL1Q96ER3 474 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 LZTS2Q9BRK4 669 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 NSRP1Q9H0G5 558 aaKnown RBP15.3■□□□□ 0.04
COL16A1-214ENST00000488128 ETNK1Q9HBU6 452 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 ALG6Q9Y672 507 aa15.3■□□□□ 0.04
COL16A1-214ENST00000488128 CFAP73A6NFT4 308 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 PICALMQ13492 652 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 MESDQ14696 234 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 KNOP1Q1ED39 458 aaKnown RBP15.29■□□□□ 0.04
COL16A1-214ENST00000488128 GNPTABQ3T906 1256 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 MIS18BP1Q6P0N0 1132 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 KCTD1Q719H9 257 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 NR3C1P04150 777 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 LDHCP07864 332 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 ATP2A2P16615 1042 aaKnown RBP15.29■□□□□ 0.04
COL16A1-214ENST00000488128 MARSP56192 900 aaKnown RBP15.29■□□□□ 0.04
COL16A1-214ENST00000488128 RIPK1Q13546 671 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 COG2Q14746 738 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 ARHGAP27Q6ZUM4 889 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 RFFLQ8WZ73 363 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 ACP6Q9NPH0 428 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 CTTNBP2NLQ9P2B4 639 aa15.29■□□□□ 0.04
COL16A1-214ENST00000488128 TNRC6CQ9HCJ0 1690 aaKnown RBP15.29■□□□□ 0.04
COL16A1-214ENST00000488128 RGL2O15211 777 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 SMNDC1O75940 238 aaKnown RBP eCLIP15.28■□□□□ 0.04
COL16A1-214ENST00000488128 SUN1O94901 812 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 AGTP01019 485 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 TAL1P17542 331 aaPredicted RBP15.28■□□□□ 0.04
COL16A1-214ENST00000488128 INHBEP58166 350 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 PPP4CP60510 307 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 ZC2HC1CQ53FD0 456 aaPredicted RBP15.28■□□□□ 0.04
COL16A1-214ENST00000488128 RNF217Q8TC41 542 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 SLC20A1Q8WUM9 679 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 SPIRE2Q8WWL2 714 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 DNAJC12Q9UKB3 198 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 PFASO15067 1338 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 C6orf229H3BNL8 230 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 RIMBP2O15034 1052 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 PRKCIP41743 596 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 SNAP25P60880 206 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 ADCY2Q08462 1091 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 MGAT5Q09328 741 aa15.28■□□□□ 0.04
COL16A1-214ENST00000488128 CTTNQ14247 550 aaKnown RBP15.28■□□□□ 0.04
COL16A1-214ENST00000488128 SPATS2LQ9NUQ6 558 aaKnown RBP15.28■□□□□ 0.04
COL16A1-214ENST00000488128 MAP3K13O43283 966 aa15.27■□□□□ 0.04
COL16A1-214ENST00000488128 CATSPER3Q86XQ3 398 aa15.27■□□□□ 0.04
COL16A1-214ENST00000488128 MXD3Q9BW11 206 aa15.27■□□□□ 0.04
COL16A1-214ENST00000488128 DHX36Q9H2U1 1008 aaKnown RBP15.27■□□□□ 0.04
COL16A1-214ENST00000488128 MTRF1LQ9UGC7 380 aaKnown RBP15.27■□□□□ 0.04
COL16A1-214ENST00000488128 POLLQ9UGP5 575 aa15.27■□□□□ 0.04
COL16A1-214ENST00000488128 GGA1Q9UJY5 639 aa15.27■□□□□ 0.04
COL16A1-214ENST00000488128 LTBP4Q8N2S1 1624 aa15.27■□□□□ 0.04
COL16A1-214ENST00000488128 KIAA1551Q9HCM1 1747 aa15.27■□□□□ 0.04
COL16A1-214ENST00000488128 VCAM1P19320 739 aa15.27■□□□□ 0.03
COL16A1-214ENST00000488128 TNFAIP3P21580 790 aa15.27■□□□□ 0.03
COL16A1-214ENST00000488128 CCND1P24385 295 aa15.27■□□□□ 0.03
COL16A1-214ENST00000488128 PTGIRP43119 386 aa15.27■□□□□ 0.03
COL16A1-214ENST00000488128 CYP2J2P51589 502 aa15.27■□□□□ 0.03
COL16A1-214ENST00000488128 JAM2P57087 298 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms