RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 HERVK_113P62684 666 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 MRPS21P82921 87 aaKnown RBP5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 ADAM15Q13444 863 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 PCBP1Q15365 356 aaKnown RBP eCLIP5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 CSRP2Q16527 193 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 CCDC142Q17RM4 750 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 ATP13A4Q4VNC1 1196 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 RNF219Q5W0B1 726 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 NECAB2Q7Z6G3 386 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 NME9Q86XW9 330 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 SPATS2Q86XZ4 545 aaKnown RBP5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 AFAP1L2Q8N4X5 818 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 EFHBQ8N7U6 833 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 WDR66Q8TBY9 1149 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 KCNH7Q9NS40 1196 aa5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 THG1LQ9NWX6 298 aaKnown RBP5.13□□□□□ -1.59
HMGB1P36-201ENST00000487709 SCDO00767 359 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 FKBP9O95302 570 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 KCNA6P17658 529 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 ADRA1BP35368 520 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 MAN2A2P49641 1150 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 MECP2P51608 486 aaKnown RBP5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 KIF11P52732 1056 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 ATP2C1P98194 919 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 IQSEC1Q6DN90 963 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 FKBP9P1Q75LS8 142 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 OTOP1Q7RTM1 612 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 SMC1BQ8NDV3 1235 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 MIEF2Q96C03 454 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 GPR101Q96P66 508 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 MTFR1LQ9H019 292 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 SMURF1Q9HCE7 757 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 TOMM22Q9NS69 142 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 HOMER2Q9NSB8 354 aa5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 TYW1Q9NV66 732 aaKnown RBP5.12□□□□□ -1.59
HMGB1P36-201ENST00000487709 PMS2P1A4D2B8 440 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 ZNF891A8MT65 544 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 TRAF5O00463 557 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 MAFGO15525 162 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 GCP02774 474 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 CDK11BP21127 795 aaKnown RBP5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 PROZP22891 400 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 PTGS2P35354 604 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 ATXN1P54253 815 aaKnown RBP5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 TMPRSS15P98073 1019 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 DSG1Q02413 1049 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 TOB2Q14106 344 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 TMEM132BQ14DG7 1078 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 SEC23AQ15436 765 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 SEPT7Q16181 437 aaKnown RBP5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 DDB1Q16531 1140 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 MBNL2Q5VZF2 373 aaKnown RBP5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 CC2D1AQ6P1N0 951 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 HDGFL2Q7Z4V5 671 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 MRGPREQ86SM8 312 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 VRK3Q8IV63 474 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 KIAA1958Q8N8K9 716 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 PRPF38AQ8NAV1 312 aaKnown RBP5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 HIPK4Q8NE63 616 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 RABGGTAQ92696 567 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 GPR87Q9BY21 358 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 OXSMQ9NWU1 459 aa5.11□□□□□ -1.59
HMGB1P36-201ENST00000487709 PRAMEF22A3QJZ6 481 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 FOXP2O15409 715 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 GPR39O43194 453 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 ATP2A2P16615 1042 aaKnown RBP5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 BPIP17213 487 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 FBLP22087 321 aaKnown RBP5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 CD40P25942 277 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 LSP1P33241 339 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 FNTBP49356 437 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 SESN3P58005 492 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 AMPD3Q01432 767 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 ADCY1Q08828 1119 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 STAT4Q14765 748 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 DDX42Q86XP3 938 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 NOSTRINQ8IVI9 506 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 GSPT2Q8IYD1 628 aaKnown RBP5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 NXPE1Q8N323 547 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 SLC25A43Q8WUT9 341 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 CHTF18Q8WVB6 975 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 ASB15Q8WXK1 588 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 HAS1Q92839 578 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 PGBD4Q96DM1 585 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 GPATCH3Q96I76 525 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 RPL10LQ96L21 214 aaKnown RBP5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 PTGFRNQ9P2B2 879 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 ZNHIT2Q9UHR6 403 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 KCNG1Q9UIX4 513 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 SPO11Q9Y5K1 396 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 B3GALT1Q9Y5Z6 326 aa5.1□□□□□ -1.59
HMGB1P36-201ENST00000487709 WASHC2AQ641Q2 1341 aa5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 NEMP1O14524 444 aa5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 ELAVL1Q15717 326 aaKnown RBP5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 LRCH2Q5VUJ6 765 aa5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 TIGD7Q6NT04 549 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 GAREM2Q75VX8 874 aa5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 C7orf31Q8N865 590 aa5.09□□□□□ -1.59
HMGB1P36-201ENST00000487709 CALML6Q8TD86 181 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms