RNA–Protein interactions for RNA: ENST00000487006.2

BUD23-217, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-217ENST00000487006 ERVK-21P61565 698 aa23.82■■□□□ 1.4
BUD23-217ENST00000487006 BTG3Q14201 252 aaPredicted RBP23.82■■□□□ 1.4
BUD23-217ENST00000487006 TWF2Q6IBS0 349 aaKnown RBP23.82■■□□□ 1.4
BUD23-217ENST00000487006 C1orf186Q6ZWK4 172 aa23.82■■□□□ 1.4
BUD23-217ENST00000487006 ECHDC2Q86YB7 292 aa23.82■■□□□ 1.4
BUD23-217ENST00000487006 RNF169Q8NCN4 708 aa23.82■■□□□ 1.4
BUD23-217ENST00000487006 RASSF8Q8NHQ8 419 aa23.82■■□□□ 1.4
BUD23-217ENST00000487006 SYMPKQ92797 1274 aaKnown RBP23.82■■□□□ 1.4
BUD23-217ENST00000487006 CHST12Q9NRB3 414 aa23.82■■□□□ 1.4
BUD23-217ENST00000487006 TMEM161AQ9NX61 479 aa23.82■■□□□ 1.4
BUD23-217ENST00000487006 STXBP5LQ9Y2K9 1186 aa23.82■■□□□ 1.4
BUD23-217ENST00000487006 TRANK1O15050 2925 aa23.82■■□□□ 1.4
BUD23-217ENST00000487006 SLC26A4O43511 780 aa23.81■■□□□ 1.4
BUD23-217ENST00000487006 TSPAN1O60635 241 aa23.81■■□□□ 1.4
BUD23-217ENST00000487006 ATF7P17544 494 aaPredicted RBP23.81■■□□□ 1.4
BUD23-217ENST00000487006 HOXA11P31270 313 aaPredicted RBP23.81■■□□□ 1.4
BUD23-217ENST00000487006 SLC12A3P55017 1021 aa23.81■■□□□ 1.4
BUD23-217ENST00000487006 POU5F1BQ06416 359 aa23.81■■□□□ 1.4
BUD23-217ENST00000487006 RAD51AP2Q09MP3 1159 aa23.81■■□□□ 1.4
BUD23-217ENST00000487006 DAW1Q8N136 415 aa23.81■■□□□ 1.4
BUD23-217ENST00000487006 FIBCD1Q8N539 461 aa23.81■■□□□ 1.4
BUD23-217ENST00000487006 KRI1Q8N9T8 703 aaKnown RBP23.81■■□□□ 1.4
BUD23-217ENST00000487006 KIFC3Q9BVG8 833 aa23.81■■□□□ 1.4
BUD23-217ENST00000487006 BLOC1S4Q9NUP1 217 aa23.81■■□□□ 1.4
BUD23-217ENST00000487006 RNF19AQ9NV58 838 aa23.81■■□□□ 1.4
BUD23-217ENST00000487006 DACT1Q9NYF0 836 aa23.81■■□□□ 1.4
BUD23-217ENST00000487006 MORC2Q9Y6X9 1032 aaPredicted RBP23.81■■□□□ 1.4
BUD23-217ENST00000487006 A0A0U1RQF3 1178 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 B4GALT5O43286 388 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 HIP1RO75146 1068 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 ERLIN2O94905 339 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 BRD1O95696 1058 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 LINC00271P0C7V0 271 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 MAPK7Q13164 816 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 AMHR2Q16671 573 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 CDCA2Q69YH5 1023 aaPredicted RBP23.8■■□□□ 1.4
BUD23-217ENST00000487006 SYT2Q8N9I0 419 aaPredicted RBP23.8■■□□□ 1.4
BUD23-217ENST00000487006 GDPD5Q8WTR4 605 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 KIFAP3Q92845 792 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 CPB2Q96IY4 423 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 CHAMP1Q96JM3 812 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 GAS2L1Q99501 681 aaPredicted RBP23.8■■□□□ 1.4
BUD23-217ENST00000487006 NFKBIZQ9BYH8 718 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 CCSER1Q9C0I3 900 aa23.8■■□□□ 1.4
BUD23-217ENST00000487006 ELAC1Q9H777 363 aaKnown RBP23.8■■□□□ 1.4
BUD23-217ENST00000487006 MRPL42Q9Y6G3 142 aaKnown RBP23.8■■□□□ 1.4
BUD23-217ENST00000487006 COL6A3P12111 3177 aa23.79■■□□□ 1.4
BUD23-217ENST00000487006 MYO7AQ13402 2215 aa23.79■■□□□ 1.4
BUD23-217ENST00000487006 NPHP3-ACAD11A0A0J9YXS1 232 aa23.79■■□□□ 1.4
BUD23-217ENST00000487006 TBKBP1A7MCY6 615 aa23.79■■□□□ 1.4
BUD23-217ENST00000487006 SPTLC2O15270 562 aa23.79■■□□□ 1.4
BUD23-217ENST00000487006 NAMPTP43490 491 aa23.79■■□□□ 1.4
BUD23-217ENST00000487006 DNM1Q05193 864 aaKnown RBP23.79■■□□□ 1.4
BUD23-217ENST00000487006 DHX8Q14562 1220 aaKnown RBP23.79■■□□□ 1.4
BUD23-217ENST00000487006 LONRF3Q496Y0 759 aa23.79■■□□□ 1.4
BUD23-217ENST00000487006 ZNF598Q86UK7 904 aaKnown RBP23.79■■□□□ 1.4
BUD23-217ENST00000487006 CMTR2Q8IYT2 770 aaKnown RBP23.79■■□□□ 1.4
BUD23-217ENST00000487006 KCTD17Q8N5Z5 321 aa23.79■■□□□ 1.4
BUD23-217ENST00000487006 HCSTQ9UBK5 93 aa23.79■■□□□ 1.4
BUD23-217ENST00000487006 TCHHQ07283 1943 aa23.78■■□□□ 1.4
BUD23-217ENST00000487006 YEATS4O95619 227 aa23.78■■□□□ 1.4
BUD23-217ENST00000487006 IGFBP4P22692 258 aa23.78■■□□□ 1.4
BUD23-217ENST00000487006 CACNB1Q02641 598 aaPredicted RBP23.78■■□□□ 1.4
BUD23-217ENST00000487006 MCM6Q14566 821 aa23.78■■□□□ 1.4
BUD23-217ENST00000487006 EPC2Q52LR7 807 aa23.78■■□□□ 1.4
BUD23-217ENST00000487006 UBXN11Q5T124 520 aa23.78■■□□□ 1.4
BUD23-217ENST00000487006 DEPTORQ8TB45 409 aa23.78■■□□□ 1.4
BUD23-217ENST00000487006 RAD54LQ92698 747 aa23.78■■□□□ 1.4
BUD23-217ENST00000487006 LPPQ93052 612 aa23.78■■□□□ 1.4
BUD23-217ENST00000487006 FAM105AQ9NUU6 356 aa23.78■■□□□ 1.4
BUD23-217ENST00000487006 MEIS3P2A8K0S8 358 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 SFI1A8K8P3 1242 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 LPXNO60711 386 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 ARF4P18085 180 aaPredicted RBP23.77■■□□□ 1.4
BUD23-217ENST00000487006 LIG1P18858 919 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 GUCY2CP25092 1073 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 PPP2R5AQ15172 486 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 ARSHQ5FYA8 562 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 CLLU1OSQ5K130 101 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 GPBP1Q86WP2 473 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 ZBTB8OSQ8IWT0 167 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 TMEM192Q8IY95 271 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 FBXO22Q8NEZ5 403 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 IFT74Q96LB3 600 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 TRAIPQ9BWF2 469 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 RNF216Q9NWF9 866 aaPredicted RBP23.77■■□□□ 1.4
BUD23-217ENST00000487006 USP20Q9Y2K6 914 aa23.77■■□□□ 1.4
BUD23-217ENST00000487006 TTLL13PA6NNM8 815 aa23.76■■□□□ 1.39
BUD23-217ENST00000487006 PPP6R2O75170 966 aa23.76■■□□□ 1.39
BUD23-217ENST00000487006 EDN1P05305 212 aa23.76■■□□□ 1.39
BUD23-217ENST00000487006 CTNNB1P35222 781 aa23.76■■□□□ 1.39
BUD23-217ENST00000487006 PEX3P56589 373 aa23.76■■□□□ 1.39
BUD23-217ENST00000487006 PCBP1Q15365 356 aaKnown RBP eCLIP23.76■■□□□ 1.39
BUD23-217ENST00000487006 CDR2LQ86X02 465 aaPredicted RBP23.76■■□□□ 1.39
BUD23-217ENST00000487006 HELQQ8TDG4 1101 aa23.76■■□□□ 1.39
BUD23-217ENST00000487006 DRC1Q96MC2 740 aa23.76■■□□□ 1.39
BUD23-217ENST00000487006 EIF2AQ9BY44 585 aaKnown RBP23.76■■□□□ 1.39
BUD23-217ENST00000487006 CCDC113Q9H0I3 377 aa23.76■■□□□ 1.39
BUD23-217ENST00000487006 C2orf40Q9H1Z8 148 aa23.76■■□□□ 1.39
BUD23-217ENST00000487006 PCDHB2Q9Y5E7 798 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms