RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SRGAP2CP0DJJ0 459 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 GAP43P17677 238 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 BMP6P22004 513 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 NMT1P30419 496 aaKnown RBP14.11□□□□□ -0.15
HDAC6-229ENST00000486665 NPTX2P47972 431 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 PTK7Q13308 1070 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 PPIGQ13427 754 aaKnown RBP eCLIP14.11□□□□□ -0.154e-8■■□□□ 12.8
HDAC6-229ENST00000486665 CAPSQ13938 189 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 KCNB1Q14721 858 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 ODR4Q5SWX8 454 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 GLIS3Q8NEA6 775 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 SYAP1Q96A49 352 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-229ENST00000486665 VWCEQ96DN2 955 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 GSDMAQ96QA5 445 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 KIFC3Q9BVG8 833 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 ADAMTS10Q9H324 1103 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 CDHR5Q9HBB8 845 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 NOD1Q9Y239 953 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 MROH7Q68CQ1 1323 aa14.11□□□□□ -0.15
HDAC6-229ENST00000486665 LOXHD1Q8IVV2 1947 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 CCDC169A6NNP5 214 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 ASAP2O43150 1006 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 GPR32O75388 356 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 RHOBTB3O94955 611 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 NLRP11P59045 1033 aaKnown RBP14.1□□□□□ -0.15
HDAC6-229ENST00000486665 STK4Q13043 487 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 MORC3Q14149 939 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 ADGRE1Q14246 886 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 MXD4Q14582 209 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-229ENST00000486665 ZSCAN23Q3MJ62 389 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 TAF2Q6P1X5 1199 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 RPAINQ86UA6 219 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 NME8Q8N427 588 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 SPIRE2Q8WWL2 714 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 IFT74Q96LB3 600 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 MAP7D2Q96T17 732 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 NTPCRQ9BSD7 190 aaKnown RBP14.1□□□□□ -0.15
HDAC6-229ENST00000486665 GZF1Q9H116 711 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-229ENST00000486665 PRDM12Q9H4Q4 367 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 SLC39A2Q9NP94 309 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 EXOC1Q9NV70 894 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 GDAQ9Y2T3 454 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 TRIP12Q14669 1992 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-229ENST00000486665 SCN5AQ14524 2016 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 ADGRA3Q8IWK6 1321 aa14.1□□□□□ -0.15
HDAC6-229ENST00000486665 XIRP2A4UGR9 3374 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 A0A087WZ62 844 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 SLC16A4O15374 487 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 MYBP10242 640 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 THPOP40225 353 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 NAMPTP43490 491 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 GPC3P51654 580 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 CASP5P51878 434 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 PSMD2Q13200 908 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 KIZQ2M2Z5 673 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 FAM26FQ5R3K3 315 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 ZNF720Q7Z2F6 126 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 FAM178BQ8IXR5 827 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 SMYD4Q8IYR2 804 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-229ENST00000486665 RNF149Q8NC42 400 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 KIAA0895Q8NCT3 520 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 TMEM161BQ8NDZ6 487 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 PPM1EQ8WY54 764 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 CCDC47Q96A33 483 aaKnown RBP14.09□□□□□ -0.15
HDAC6-229ENST00000486665 NLRP4Q96MN2 994 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 FDXACB1Q9BRP7 624 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-229ENST00000486665 WNT8AQ9H1J5 351 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 MRPL44Q9H9J2 332 aaKnown RBP14.09□□□□□ -0.15
HDAC6-229ENST00000486665 C17orf75Q9HAS0 396 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 KMT5AQ9NQR1 393 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 RMND1Q9NWS8 449 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 LARSQ9P2J5 1176 aaKnown RBP14.09□□□□□ -0.15
HDAC6-229ENST00000486665 SEL1LQ9UBV2 794 aa14.09□□□□□ -0.15
HDAC6-229ENST00000486665 YBX2Q9Y2T7 364 aaKnown RBP14.09□□□□□ -0.15
HDAC6-229ENST00000486665 KAT6AQ92794 2004 aa14.08□□□□□ -0.15
HDAC6-229ENST00000486665 TRANK1O15050 2925 aa14.08□□□□□ -0.15
HDAC6-229ENST00000486665 SYCE3A1L190 88 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 LRRIQ4A6NIV6 560 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 TLR3O15455 904 aaKnown RBP14.08□□□□□ -0.16
HDAC6-229ENST00000486665 LETM1O95202 739 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-229ENST00000486665 CHRNA1P02708 482 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 MAPTP10636 758 aaKnown RBP14.08□□□□□ -0.16
HDAC6-229ENST00000486665 NCKAP1LP55160 1127 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 CCL23P55773 120 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 MRPS6P82932 125 aaKnown RBP14.08□□□□□ -0.16
HDAC6-229ENST00000486665 MGAT3Q09327 533 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 DMP1Q13316 513 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-229ENST00000486665 PPP2R5AQ15172 486 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 ZC2HC1CQ53FD0 456 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-229ENST00000486665 ZNF658Q5TYW1 1059 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-229ENST00000486665 TRAF7Q6Q0C0 670 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 EPM2AIP1Q7L775 607 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-229ENST00000486665 TMEM199Q8N511 208 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 DEPTORQ8TB45 409 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 STRA6Q9BX79 667 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 OSBPL7Q9BZF2 842 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 MINDY3Q9H8M7 445 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 IFT122Q9HBG6 1241 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 IL23AQ9NPF7 189 aa14.08□□□□□ -0.16
HDAC6-229ENST00000486665 OLFML3Q9NRN5 406 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms