RNA–Protein interactions for RNA: ENST00000486560.1

GSDMB-210, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 318 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-210ENST00000486560 LPPQ93052 612 aa13.27□□□□□ -0.29
GSDMB-210ENST00000486560 CLIC6Q96NY7 704 aa13.27□□□□□ -0.29
GSDMB-210ENST00000486560 USP28Q96RU2 1077 aa13.27□□□□□ -0.29
GSDMB-210ENST00000486560 MMTAG2Q9BU76 263 aaKnown RBP13.27□□□□□ -0.29
GSDMB-210ENST00000486560 TRIM6Q9C030 488 aaPredicted RBP13.27□□□□□ -0.29
GSDMB-210ENST00000486560 CSRNP2Q9H175 543 aa13.27□□□□□ -0.29
GSDMB-210ENST00000486560 ZHX3Q9H4I2 956 aa13.27□□□□□ -0.29
GSDMB-210ENST00000486560 TMEM161AQ9NX61 479 aa13.27□□□□□ -0.29
GSDMB-210ENST00000486560 MRPL42Q9Y6G3 142 aaKnown RBP13.27□□□□□ -0.29
GSDMB-210ENST00000486560 HIP1RO75146 1068 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 F13A1P00488 732 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 CYP11B2P19099 503 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 CA8P35219 290 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 ARL2P36404 184 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 LONP1P36776 959 aaKnown RBP13.26□□□□□ -0.29
GSDMB-210ENST00000486560 ERVK-21P61565 698 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 GPM6BQ13491 265 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 ADGRE1Q14246 886 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 DSC3Q14574 896 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 PPP2R5AQ15172 486 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 EPC2Q52LR7 807 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 KCNK18Q7Z418 384 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 CDR2LQ86X02 465 aaPredicted RBP13.26□□□□□ -0.29
GSDMB-210ENST00000486560 CMTR2Q8IYT2 770 aaKnown RBP13.26□□□□□ -0.29
GSDMB-210ENST00000486560 AK8Q96MA6 479 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 PNMA5Q96PV4 448 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 KIFC3Q9BVG8 833 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 GBP3Q9H0R5 595 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 HCSTQ9UBK5 93 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 CCDC39Q9UFE4 941 aa13.26□□□□□ -0.29
GSDMB-210ENST00000486560 TRIP11Q15643 1979 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 B4GALT5O43286 388 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 HOXA2O43364 376 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 PLA2G4BP0C869 781 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 SKIP12755 728 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 PLCG1P19174 1290 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 PEX3P56589 373 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 PTENP60484 403 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 RNASELQ05823 741 aaKnown RBP13.25□□□□□ -0.29
GSDMB-210ENST00000486560 PKP1Q13835 747 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 NOTUMQ6P988 496 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 GPBP1Q86WP2 473 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 THNSL1Q8IYQ7 743 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 SP7Q8TDD2 431 aaPredicted RBP13.25□□□□□ -0.29
GSDMB-210ENST00000486560 BSNDQ8WZ55 320 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 KIFAP3Q92845 792 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 SAMD11Q96NU1 681 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 RUSC1Q9BVN2 902 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 PANK2Q9BZ23 570 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 CHST12Q9NRB3 414 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 AGPAT5Q9NUQ2 364 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 FAM105AQ9NUU6 356 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 RWDD3Q9Y3V2 267 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 LAMA3Q16787 3333 aa13.25□□□□□ -0.29
GSDMB-210ENST00000486560 COL4A6Q14031 1691 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 PRRC2BQ5JSZ5 2229 aaKnown RBP13.24□□□□□ -0.29
GSDMB-210ENST00000486560 NPHP3-ACAD11A0A0J9YXS1 232 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 SFI1A8K8P3 1242 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 TSPAN1O60635 241 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 NPTXRO95502 500 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 PRKCBP05771 671 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 RAB27AP51159 221 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 MBTD1Q05BQ5 628 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 DMP1Q13316 513 aaPredicted RBP13.24□□□□□ -0.29
GSDMB-210ENST00000486560 MCM6Q14566 821 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 PTPAQ15257 358 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 PTPROQ16827 1216 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 RINT1Q6NUQ1 792 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 PDILTQ8N807 584 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 KRI1Q8N9T8 703 aaKnown RBP13.24□□□□□ -0.29
GSDMB-210ENST00000486560 SLC17A8Q8NDX2 589 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 SYMPKQ92797 1274 aaKnown RBP13.24□□□□□ -0.29
GSDMB-210ENST00000486560 ZNF689Q96CS4 500 aaPredicted RBP13.24□□□□□ -0.29
GSDMB-210ENST00000486560 PGBD4Q96DM1 585 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 EPSTI1Q96J88 318 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 DRC1Q96MC2 740 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 C11orf84Q9BUA3 381 aaPredicted RBP13.24□□□□□ -0.29
GSDMB-210ENST00000486560 C2orf40Q9H1Z8 148 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 AAASQ9NRG9 546 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 FBXO2Q9UK22 296 aaPredicted RBP13.24□□□□□ -0.29
GSDMB-210ENST00000486560 PCDHB2Q9Y5E7 798 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 PCDHB12Q9Y5F1 795 aa13.24□□□□□ -0.29
GSDMB-210ENST00000486560 A0A0U1RQF3 1178 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 TULP1O00294 542 aaPredicted RBP13.23□□□□□ -0.29
GSDMB-210ENST00000486560 SPTLC2O15270 562 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 ITGA4P13612 1032 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 BMPR1AP36894 532 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 PBX3P40426 434 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 MATR3P43243 847 aaKnown RBP eCLIP13.23□□□□□ -0.29
GSDMB-210ENST00000486560 NAMPTP43490 491 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 PRPF4BQ13523 1007 aaKnown RBP13.23□□□□□ -0.29
GSDMB-210ENST00000486560 MAPK6Q16659 721 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 TMEM119Q4V9L6 283 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 CLLU1OSQ5K130 101 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 GLB1LQ6UWU2 654 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 USP49Q70CQ1 688 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 LRRC43Q8N309 656 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 URGCPQ8TCY9 931 aa13.23□□□□□ -0.29
GSDMB-210ENST00000486560 FAM193BQ96PV7 902 aaPredicted RBP13.23□□□□□ -0.29
GSDMB-210ENST00000486560 EIF2AQ9BY44 585 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms