RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 HELQQ8TDG4 1101 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 SNX29Q8TEQ0 813 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 BACH2Q9BYV9 841 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 FAM105AQ9NUU6 356 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 TYW1Q9NV66 732 aaKnown RBP14.32□□□□□ -0.12
CHMP3-208ENST00000486404 HCSTQ9UBK5 93 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 DBR1Q9UK59 544 aaKnown RBP14.32□□□□□ -0.12
CHMP3-208ENST00000486404 PLAGL2Q9UPG8 496 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 PCDHB6Q9Y5E3 794 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 STK24Q9Y6E0 443 aa14.32□□□□□ -0.12
CHMP3-208ENST00000486404 MYH15Q9Y2K3 1946 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 A0A087WWV3 80 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 LRRIQ4A6NIV6 560 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 SPATA31C1P0DKV0 1188 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 XRCC6P12956 609 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHMP3-208ENST00000486404 KCNA5P22460 613 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 PPM1AP35813 382 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 TOB1P50616 345 aaPredicted RBP14.31□□□□□ -0.12
CHMP3-208ENST00000486404 CAPSQ13938 189 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 PCBP1Q15365 356 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHMP3-208ENST00000486404 CLLU1OSQ5K130 101 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 KRT79Q5XKE5 535 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 LARP1BQ659C4 914 aaKnown RBP14.31□□□□□ -0.12
CHMP3-208ENST00000486404 GLB1LQ6UWU2 654 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 MAEAQ7L5Y9 396 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 ASAP3Q8TDY4 903 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 RSPH1Q8WYR4 309 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 PGBD4Q96DM1 585 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 ZNF558Q96NG5 402 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 INPP5FQ9Y2H2 1132 aa14.31□□□□□ -0.12
CHMP3-208ENST00000486404 VPS37CA5D8V6 355 aaPredicted RBP14.3□□□□□ -0.12
CHMP3-208ENST00000486404 FGF18O76093 207 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 ATF7P17544 494 aaPredicted RBP14.3□□□□□ -0.12
CHMP3-208ENST00000486404 MUTP22033 750 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 PRPHP41219 470 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 UBE3AQ05086 875 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 LONRF3Q496Y0 759 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 PADI6Q6TGC4 694 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 DTHD1Q6ZMT9 781 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 ZNF598Q86UK7 904 aaKnown RBP14.3□□□□□ -0.12
CHMP3-208ENST00000486404 ZBTB8OSQ8IWT0 167 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 URGCPQ8TCY9 931 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 POF1BQ8WVV4 589 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 LPPQ93052 612 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 CASD1Q96PB1 797 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 UHRF1Q96T88 793 aaPredicted RBP14.3□□□□□ -0.12
CHMP3-208ENST00000486404 TRAIPQ9BWF2 469 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 MINDY3Q9H8M7 445 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 RNF19AQ9NV58 838 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 CLDND1Q9NY35 253 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 TTC28Q96AY4 2481 aa14.3□□□□□ -0.12
CHMP3-208ENST00000486404 NCK2O43639 380 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 TSPAN1O60635 241 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 PDCP20941 246 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 GLRA2P23416 452 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 AXLP30530 894 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 ARL2P36404 184 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 PTENP60484 403 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 RNASELQ05823 741 aaKnown RBP14.29□□□□□ -0.12
CHMP3-208ENST00000486404 TMEM132AQ24JP5 1023 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 NOTUMQ6P988 496 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 C4orf32Q8N8J7 132 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 MICAL1Q8TDZ2 1067 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 PABPC5Q96DU9 382 aaKnown RBP14.29□□□□□ -0.12
CHMP3-208ENST00000486404 CCDC51Q96ER9 411 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 TRIM6Q9C030 488 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-208ENST00000486404 IGFLR1Q9H665 355 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 CWH43Q9H720 699 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 GPRC5CQ9NQ84 441 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 ENTPD7Q9NQZ7 604 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 TLR9Q9NR96 1032 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.29□□□□□ -0.12
CHMP3-208ENST00000486404 DDX19AQ9NUU7 478 aaKnown RBP14.29□□□□□ -0.12
CHMP3-208ENST00000486404 PCDHB2Q9Y5E7 798 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 CNTNAP2Q9UHC6 1331 aa14.29□□□□□ -0.12
CHMP3-208ENST00000486404 ZC3H11AO75152 810 aaKnown RBP eCLIP14.28□□□□□ -0.12
CHMP3-208ENST00000486404 PBX3P40426 434 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 ATP2C1P98194 919 aaPredicted RBP14.28□□□□□ -0.12
CHMP3-208ENST00000486404 MBTD1Q05BQ5 628 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 PDIA5Q14554 519 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 ZRSR1Q15695 479 aaKnown RBP14.28□□□□□ -0.12
CHMP3-208ENST00000486404 KCNT2Q6UVM3 1135 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 BRAPQ7Z569 592 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 HACE1Q8IYU2 909 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 IGSF22Q8N9C0 903 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 SPPL3Q8TCT6 385 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 CDK5RAP3Q96JB5 506 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 NFKBIZQ9BYH8 718 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 GBP3Q9H0R5 595 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 C2orf40Q9H1Z8 148 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 BHMT2Q9H2M3 363 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 RSAD1Q9HA92 442 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 SPG21Q9NZD8 308 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 PUF60Q9UHX1 559 aaKnown RBP14.28□□□□□ -0.12
CHMP3-208ENST00000486404 KIAA1024Q9UPX6 916 aa14.28□□□□□ -0.12
CHMP3-208ENST00000486404 NCOR1O75376 2440 aa14.27□□□□□ -0.12
CHMP3-208ENST00000486404 CARNS1A5YM72 827 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 VWA3AA6NCI4 1184 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 PP2D1A8MPX8 630 aa14.27□□□□□ -0.13
CHMP3-208ENST00000486404 H3BQ06 376 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms