RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PNMA1Q8ND90 353 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 CMASQ8NFW8 434 aaPredicted RBP9.51□□□□□ -0.89
XRN1-212ENST00000486211 SEPT1Q8WYJ6 367 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 DDX1Q92499 740 aaKnown RBP9.51□□□□□ -0.89
XRN1-212ENST00000486211 MAP4K1Q92918 833 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 THAP11Q96EK4 314 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 PCYT2Q99447 389 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 RHOBTB2Q9BYZ6 727 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 LRRCC1Q9C099 1032 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 SEMA4GQ9NTN9 838 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 GCN1Q92616 2671 aaKnown RBP9.51□□□□□ -0.89
XRN1-212ENST00000486211 CLUHO75153 1309 aa9.51□□□□□ -0.89
XRN1-212ENST00000486211 IGF2RP11717 2491 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 ASH1LQ9NR48 2969 aaKnown RBP9.5□□□□□ -0.89
XRN1-212ENST00000486211 GCOM1H8Y6P7 765 aaPredicted RBP9.5□□□□□ -0.89
XRN1-212ENST00000486211 HOXA2O43364 376 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 ATP9AO75110 1047 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 ZIC2O95409 532 aaPredicted RBP9.5□□□□□ -0.89
XRN1-212ENST00000486211 POLR2MP0CAP2 368 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 KCNA2P16389 499 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 METAP2P50579 478 aaKnown RBP eCLIP9.5□□□□□ -0.89
XRN1-212ENST00000486211 POLGP54098 1239 aaPredicted RBP9.5□□□□□ -0.89
XRN1-212ENST00000486211 BCAR1P56945 870 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 GIT2Q14161 759 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 CSRP2Q16527 193 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 LPAL2Q16609 132 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 LAIR1Q6GTX8 287 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 FAM228AQ86W67 206 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 PPFIBP1Q86W92 1011 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 DGKHQ86XP1 1220 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 NME8Q8N427 588 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 PANK1Q8TE04 598 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 BCL7CQ8WUZ0 217 aaPredicted RBP9.5□□□□□ -0.89
XRN1-212ENST00000486211 SHDQ96IW2 340 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 ZKSCAN3Q9BRR0 538 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 VN1R3Q9BXE9 311 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 OSBPL6Q9BZF3 934 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 SMARCAD1Q9H4L7 1026 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 SLC27A5Q9Y2P5 690 aa9.5□□□□□ -0.89
XRN1-212ENST00000486211 TAF4O00268 1085 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 GPR182O15218 404 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 DHX16O60231 1041 aaKnown RBP9.49□□□□□ -0.89
XRN1-212ENST00000486211 PAPLNO95428 1278 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 FGAP02671 866 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 RETP07949 1114 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 LAMP2P13473 410 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 MAGEA9P43362 315 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 GPC5P78333 572 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 RING1Q06587 406 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 BMS1Q14692 1282 aaKnown RBP9.49□□□□□ -0.89
XRN1-212ENST00000486211 PLCB4Q15147 1175 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 SLC35G1Q2M3R5 365 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 MTHFD1LQ6UB35 978 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 DDX53Q86TM3 631 aaKnown RBP9.49□□□□□ -0.89
XRN1-212ENST00000486211 STAG2Q8N3U4 1231 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 FAM160A2Q8N612 972 aaPredicted RBP9.49□□□□□ -0.89
XRN1-212ENST00000486211 CLDN23Q96B33 292 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 TMEM169Q96HH4 297 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 KLHL5Q96PQ7 755 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 RPP25Q9BUL9 199 aaKnown RBP9.49□□□□□ -0.89
XRN1-212ENST00000486211 FAM126AQ9BYI3 521 aaPredicted RBP9.49□□□□□ -0.89
XRN1-212ENST00000486211 LTB4R2Q9NPC1 389 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 ZBTB40Q9NUA8 1239 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 GINS2Q9Y248 185 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 FCF1Q9Y324 198 aaKnown RBP9.49□□□□□ -0.89
XRN1-212ENST00000486211 NUMBLQ9Y6R0 609 aa9.49□□□□□ -0.89
XRN1-212ENST00000486211 FAM170BA6NMN3 283 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 SRRM3A6NNA2 597 aaPredicted RBP9.48□□□□□ -0.89
XRN1-212ENST00000486211 ZBTB5O15062 677 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 ST8SIA5O15466 376 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 LILRB3O75022 631 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 CNPP09543 421 aaKnown RBP9.48□□□□□ -0.89
XRN1-212ENST00000486211 PARP1P09874 1014 aaKnown RBP9.48□□□□□ -0.89
XRN1-212ENST00000486211 ALDH7A1P49419 539 aaKnown RBP9.48□□□□□ -0.89
XRN1-212ENST00000486211 SNW1Q13573 536 aaKnown RBP9.48□□□□□ -0.89
XRN1-212ENST00000486211 UBXN2BQ14CS0 331 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 MLF2Q15773 248 aaPredicted RBP9.48□□□□□ -0.89
XRN1-212ENST00000486211 ODR4Q5SWX8 454 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 PCNX4Q63HM2 1172 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 ECHDC2Q86YB7 292 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 TBC1D10CQ8IV04 446 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 KIAA0319LQ8IZA0 1049 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 ABI1Q8IZP0 508 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 TMEM87AQ8NBN3 555 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 GIMAP8Q8ND71 665 aaPredicted RBP9.48□□□□□ -0.89
XRN1-212ENST00000486211 ST13P5Q8NFI4 369 aaPredicted RBP9.48□□□□□ -0.89
XRN1-212ENST00000486211 STAMQ92783 540 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 ZNF707Q96C28 371 aaPredicted RBP9.48□□□□□ -0.89
XRN1-212ENST00000486211 IGSF21Q96ID5 467 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 WASF3Q9UPY6 502 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 NEDD4P46934 1319 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 MYH15Q9Y2K3 1946 aa9.48□□□□□ -0.89
XRN1-212ENST00000486211 CCDC195A0A1B0GUA6 201 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 TARSP26639 723 aaKnown RBP9.47□□□□□ -0.89
XRN1-212ENST00000486211 RPS9P46781 194 aaKnown RBP9.47□□□□□ -0.89
XRN1-212ENST00000486211 LIMK1P53667 647 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 HAND2P61296 217 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 PRKCQQ04759 706 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 FZD5Q13467 585 aa9.47□□□□□ -0.89
XRN1-212ENST00000486211 CYP26C1Q6V0L0 522 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms