RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 RARS2Q5T160 578 aaKnown RBP20.49■□□□□ 0.87
RHBDF1-209ENST00000486045 CES5AQ6NT32 575 aa20.49■□□□□ 0.87
RHBDF1-209ENST00000486045 CATSPER4Q7RTX7 472 aa20.49■□□□□ 0.87
RHBDF1-209ENST00000486045 ZNF410Q86VK4 478 aa20.49■□□□□ 0.87
RHBDF1-209ENST00000486045 KREMEN2Q8NCW0 462 aa20.49■□□□□ 0.87
RHBDF1-209ENST00000486045 FEZF2Q8TBJ5 459 aa20.49■□□□□ 0.87
RHBDF1-209ENST00000486045 TRAIPQ9BWF2 469 aa20.49■□□□□ 0.87
RHBDF1-209ENST00000486045 NRDE2Q9H7Z3 1164 aa20.49■□□□□ 0.87
RHBDF1-209ENST00000486045 FAM105AQ9NUU6 356 aa20.49■□□□□ 0.87
RHBDF1-209ENST00000486045 KCNJ14Q9UNX9 436 aa20.49■□□□□ 0.87
RHBDF1-209ENST00000486045 B4GALT3O60512 393 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 EPCAMP16422 314 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 NPEPPSP55786 919 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 PSMC5P62195 406 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 ITIH3Q06033 890 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 NONOQ15233 471 aaKnown RBP eCLIP20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 NOMO2Q5JPE7 1267 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 MOXD1Q6UVY6 613 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 GLB1LQ6UWU2 654 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 ZNF579Q8NAF0 562 aaKnown RBP20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 IGSF21Q96ID5 467 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 GBP3Q9H0R5 595 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 DNAJB4Q9UDY4 337 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 NR2E1Q9Y466 385 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 CYP46A1Q9Y6A2 500 aa20.48■□□□□ 0.87
RHBDF1-209ENST00000486045 DTNBO60941 627 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 OFD1O75665 1012 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 GALTP07902 379 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 AVPR2P30518 371 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 LETM2Q2VYF4 491 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 ZNF274Q96GC6 653 aaPredicted RBP20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 NECTIN4Q96NY8 510 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 VN1R3Q9BXE9 311 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 INO80BQ9C086 356 aaPredicted RBP20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 SMOC2Q9H3U7 446 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 IFT122Q9HBG6 1241 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 CYP26B1Q9NR63 512 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 FAM86C1Q9NVL1 165 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 WRAP73Q9P2S5 460 aaPredicted RBP20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 VAV3Q9UKW4 847 aa20.47■□□□□ 0.87
RHBDF1-209ENST00000486045 BRD1O95696 1058 aa20.46■□□□□ 0.87
RHBDF1-209ENST00000486045 CTSAP10619 480 aa20.46■□□□□ 0.87
RHBDF1-209ENST00000486045 SKIP12755 728 aa20.46■□□□□ 0.87
RHBDF1-209ENST00000486045 SLC11A1P49279 550 aa20.46■□□□□ 0.87
RHBDF1-209ENST00000486045 RNASELQ05823 741 aaKnown RBP20.46■□□□□ 0.87
RHBDF1-209ENST00000486045 BMS1Q14692 1282 aaKnown RBP20.46■□□□□ 0.87
RHBDF1-209ENST00000486045 KRT25Q7Z3Z0 450 aa20.46■□□□□ 0.87
RHBDF1-209ENST00000486045 DDX53Q86TM3 631 aaKnown RBP20.46■□□□□ 0.87
RHBDF1-209ENST00000486045 ZNF280BQ86YH2 543 aa20.46■□□□□ 0.87
RHBDF1-209ENST00000486045 PRRX2Q99811 253 aa20.46■□□□□ 0.87
RHBDF1-209ENST00000486045 BMP2KQ9NSY1 1161 aaPredicted RBP20.46■□□□□ 0.87
RHBDF1-209ENST00000486045 ZDBF2Q9HCK1 2354 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 ZNF623O75123 536 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 ASGR2P07307 311 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 MTHFRP42898 656 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 QARSP47897 775 aaKnown RBP20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 RAB27AP51159 221 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 AFF1P51825 1210 aaKnown RBP20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 POLGP54098 1239 aaPredicted RBP20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 PPP2R5CQ13362 524 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 GALNT17Q6IS24 598 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 AGMOQ6ZNB7 445 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 TMEM87AQ8NBN3 555 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 SLC22A17Q8WUG5 538 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 TMEM143Q96AN5 459 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 RIPOR3Q96MK2 946 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 SLKQ9H2G2 1235 aaPredicted RBP20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 MINDY3Q9H8M7 445 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 KCNMB3Q9NPA1 279 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 AGPAT5Q9NUQ2 364 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 PCDHB2Q9Y5E7 798 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 COL4A3BPQ9Y5P4 624 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 IRAK3Q9Y616 596 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 USP34Q70CQ2 3546 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 WDR81Q562E7 1941 aa20.45■□□□□ 0.86
RHBDF1-209ENST00000486045 MTMR3Q13615 1198 aa20.44■□□□□ 0.86
RHBDF1-209ENST00000486045 PRPF31Q8WWY3 499 aaKnown RBP20.44■□□□□ 0.86
RHBDF1-209ENST00000486045 RSPH1Q8WYR4 309 aa20.44■□□□□ 0.86
RHBDF1-209ENST00000486045 CEP170P1Q96L14 293 aa20.44■□□□□ 0.86
RHBDF1-209ENST00000486045 JPH2Q9BR39 696 aaPredicted RBP20.44■□□□□ 0.86
RHBDF1-209ENST00000486045 UPF2Q9HAU5 1272 aaKnown RBP20.44■□□□□ 0.86
RHBDF1-209ENST00000486045 GJB4Q9NTQ9 266 aa20.44■□□□□ 0.86
RHBDF1-209ENST00000486045 DZANK1Q9NVP4 752 aa20.44■□□□□ 0.86
RHBDF1-209ENST00000486045 SORCS3Q9UPU3 1222 aa20.44■□□□□ 0.86
RHBDF1-209ENST00000486045 CCDC194A0A1B0GVG4 234 aa20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 DDHD2O94830 711 aa20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 SSBP05455 408 aaKnown RBP eCLIP20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 SRGAP2CP0DJJ0 459 aa20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 PTPN14Q15678 1187 aa20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 KIAA1841Q6NSI8 718 aa20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 CPLX2Q6PUV4 134 aaKnown RBP20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 TMC5Q6UXY8 1006 aa20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 OXER1Q8TDS5 423 aa20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 SLC7A3Q8WY07 619 aa20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 PHF20Q9BVI0 1012 aa20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 TM6SF1Q9BZW5 370 aa20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 DHX33Q9H6R0 707 aaKnown RBP20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 KMT2EQ8IZD2 1858 aa20.43■□□□□ 0.86
RHBDF1-209ENST00000486045 P4HBP07237 508 aaKnown RBP20.42■□□□□ 0.86
RHBDF1-209ENST00000486045 HOXA11P31270 313 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms