RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 DMRT1Q9Y5R6 373 aa5.97□□□□□ -1.45
GCFC2-209ENST00000486016 ELL2O00472 640 aaPredicted RBP5.96□□□□□ -1.46
GCFC2-209ENST00000486016 OPHN1O60890 802 aa5.96□□□□□ -1.46
GCFC2-209ENST00000486016 STC2O76061 302 aa5.96□□□□□ -1.46
GCFC2-209ENST00000486016 ASMTLO95671 621 aa5.96□□□□□ -1.46
GCFC2-209ENST00000486016 POU3F2P20265 443 aaPredicted RBP5.96□□□□□ -1.46
GCFC2-209ENST00000486016 SMAD3P84022 425 aaKnown RBP5.96□□□□□ -1.46
GCFC2-209ENST00000486016 DSG1Q02413 1049 aa5.96□□□□□ -1.46
GCFC2-209ENST00000486016 SPIDRQ14159 915 aa5.96□□□□□ -1.46
GCFC2-209ENST00000486016 CFAP100Q494V2 611 aa5.96□□□□□ -1.46
GCFC2-209ENST00000486016 MFSD5Q6N075 450 aa5.96□□□□□ -1.46
GCFC2-209ENST00000486016 UBE2R2Q712K3 238 aaPredicted RBP5.96□□□□□ -1.46
GCFC2-209ENST00000486016 KIF18BQ86Y91 864 aa5.96□□□□□ -1.46
GCFC2-209ENST00000486016 RTF1Q92541 710 aaKnown RBP5.96□□□□□ -1.46
GCFC2-209ENST00000486016 NAF1Q96HR8 494 aaKnown RBP5.96□□□□□ -1.46
GCFC2-209ENST00000486016 POFUT1Q9H488 388 aa5.96□□□□□ -1.46
GCFC2-209ENST00000486016 C14orf93Q9H972 538 aaKnown RBP5.96□□□□□ -1.46
GCFC2-209ENST00000486016 MAGEC2Q9UBF1 373 aaPredicted RBP5.96□□□□□ -1.46
GCFC2-209ENST00000486016 REXO2Q9Y3B8 237 aaKnown RBP5.96□□□□□ -1.46
GCFC2-209ENST00000486016 FOXN1O15353 648 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 DAPK3O43293 454 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 F2P00734 622 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 GAAP10253 952 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 NR4A1P22736 598 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 FLT3P36888 993 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 RABL3Q5HYI8 236 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 ZNF662Q6ZS27 426 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 SREK1Q8WXA9 508 aaKnown RBP5.95□□□□□ -1.46
GCFC2-209ENST00000486016 LENG9Q96B70 501 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 ZG16BQ96DA0 208 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 CRAMP1Q96RY5 1269 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 RCAN3Q9UKA8 241 aa5.95□□□□□ -1.46
GCFC2-209ENST00000486016 TGM5O43548 720 aa5.94□□□□□ -1.46
GCFC2-209ENST00000486016 CFBP00751 764 aa5.94□□□□□ -1.46
GCFC2-209ENST00000486016 LRRC32Q14392 662 aa5.94□□□□□ -1.46
GCFC2-209ENST00000486016 TIGD7Q6NT04 549 aaPredicted RBP5.94□□□□□ -1.46
GCFC2-209ENST00000486016 ZZZ3Q8IYH5 903 aa5.94□□□□□ -1.46
GCFC2-209ENST00000486016 C7orf31Q8N865 590 aa5.94□□□□□ -1.46
GCFC2-209ENST00000486016 PIK3C3Q8NEB9 887 aa5.94□□□□□ -1.46
GCFC2-209ENST00000486016 MRFAP1L1Q96HT8 127 aa5.94□□□□□ -1.46
GCFC2-209ENST00000486016 TOMM22Q9NS69 142 aa5.94□□□□□ -1.46
GCFC2-209ENST00000486016 FAM20BO75063 409 aa5.93□□□□□ -1.46
GCFC2-209ENST00000486016 LMO1P25800 156 aa5.93□□□□□ -1.46
GCFC2-209ENST00000486016 KRT40Q6A162 431 aa5.93□□□□□ -1.46
GCFC2-209ENST00000486016 SYNPOQ8N3V7 929 aa5.93□□□□□ -1.46
GCFC2-209ENST00000486016 EFHBQ8N7U6 833 aa5.93□□□□□ -1.46
GCFC2-209ENST00000486016 ATXN2LQ8WWM7 1075 aaKnown RBP5.93□□□□□ -1.46
GCFC2-209ENST00000486016 ZNF496Q96IT1 587 aaPredicted RBP5.93□□□□□ -1.46
GCFC2-209ENST00000486016 NOL10Q9BSC4 688 aaKnown RBP5.93□□□□□ -1.46
GCFC2-209ENST00000486016 ZSWIM4Q9H7M6 989 aa5.93□□□□□ -1.46
GCFC2-209ENST00000486016 NRDE2Q9H7Z3 1164 aa5.93□□□□□ -1.46
GCFC2-209ENST00000486016 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.93□□□□□ -1.46
GCFC2-209ENST00000486016 ING3Q9NXR8 418 aa5.93□□□□□ -1.46
GCFC2-209ENST00000486016 SYNPO2Q9UMS6 1093 aa5.93□□□□□ -1.46
GCFC2-209ENST00000486016 ZNF891A8MT65 544 aaPredicted RBP5.92□□□□□ -1.46
GCFC2-209ENST00000486016 GOLGA6L6A8MZA4 724 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 MFAP3LO75121 409 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 RPS6KA4O75676 772 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 FSBPO95073 299 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 PROZP22891 400 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 ZFP36P26651 326 aaKnown RBP5.92□□□□□ -1.46
GCFC2-209ENST00000486016 PTTG1IPP53801 180 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 MAN2A1Q16706 1144 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 DCAF17Q5H9S7 520 aaPredicted RBP5.92□□□□□ -1.46
GCFC2-209ENST00000486016 APBB1IPQ7Z5R6 666 aaPredicted RBP5.92□□□□□ -1.46
GCFC2-209ENST00000486016 UNC5BQ8IZJ1 945 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 NXPE1Q8N323 547 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 SLC25A43Q8WUT9 341 aaPredicted RBP5.92□□□□□ -1.46
GCFC2-209ENST00000486016 ST8SIA2Q92186 375 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 HAS1Q92839 578 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 RNPC3Q96LT9 517 aaKnown RBP5.92□□□□□ -1.46
GCFC2-209ENST00000486016 MYPNQ86TC9 1320 aa5.92□□□□□ -1.46
GCFC2-209ENST00000486016 HOXA3O43365 443 aaPredicted RBP5.91□□□□□ -1.46
GCFC2-209ENST00000486016 IPO13O94829 963 aaKnown RBP5.91□□□□□ -1.46
GCFC2-209ENST00000486016 SEC24DO94855 1032 aaPredicted RBP5.91□□□□□ -1.46
GCFC2-209ENST00000486016 NPEPPSP55786 919 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 CD69Q07108 199 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 FAM214AQ32MH5 1076 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 CCDC144BQ3MJ40 725 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 ZBTB41Q5SVQ8 909 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 DPY19L2P1Q6NXN4 242 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 MB21D1Q8N884 522 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 CHTF18Q8WVB6 975 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 PGBD4Q96DM1 585 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 HIST1H2AHQ96KK5 128 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 HIST1H2AJQ99878 128 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 FDXACB1Q9BRP7 624 aaPredicted RBP5.91□□□□□ -1.46
GCFC2-209ENST00000486016 TTPALQ9BTX7 342 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 PIF1Q9H611 641 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 CD2APQ9Y5K6 639 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 HS3ST4Q9Y661 456 aa5.91□□□□□ -1.46
GCFC2-209ENST00000486016 MAFGO15525 162 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 RAMP2O60895 175 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 ALDH1A2O94788 518 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 APOL3O95236 402 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 LY86O95711 162 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 PFKMP08237 780 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 PTGS2P35354 604 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 METTL24Q5JXM2 366 aa5.9□□□□□ -1.46
GCFC2-209ENST00000486016 GPR158Q5T848 1215 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms